Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1788 ATGCTTGAGCTGTCATTGAACCAGTTTAGAGCAGTAGGTGCTACTGGGATTTTCATCCAAGAGTTCCTAACAAAGATTGGCATTCTGAACACTCCTTCTTGGTACACTACTGGAGAGCTGGAATACTTCACAGACACCACCACCTTCTTCATTATTGAGCTCATTTTCATTAGGTGGGCTGAGGGAAGAAGATGGACCGACATCATCAAGCCCGGGTGTGTCAACACCGACCCAATCTTCCCCAACAACAAGCTCACCGGGACTGATGTTGGGTACCCAGGTGGGCATTGGTTTGACCCACTGGGCTGGGGGAGTGGCTCACCTGAGAAGATTAAAGAGTTGAGAACAAAAGAGATCAAGAATGGAAGACTGGCCATGTTGGCTATGATGGGTGCATGGTTCCAGCACATCTACACTGGTACTGGTATTATTGACATCGTCTTTGCCCACCTGGTTGATCTTGGCCATGCCACCATTTTTGCTGTGGCATATGATGTCAGTGCCTACGTGGAACCATTTGAACCATCCAAGTGA 534 0.4813 MLELSLNQFRAVGATGIFIQEFLTKIGILNTPSWYTTGELEYFTDTTTFFIIELIFIRWAEGRRWTDIIKPGCVNTDPIFPNNKLTGTDVGYPGGHWFDPLGWGSGSPEKIKELRTKEIKNGRLAMLAMMGAWFQHIYTGTGIIDIVFAHLVDLGHATIFAVAYDVSAYVEPFEPSK 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1788 177 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 11 164 IPR001344 GO:0009765|GO:0016020
Dere06g1788 177 Pfam Chlorophyll A-B binding protein 12 136 IPR022796 -
Dere06g1788 177 SUPERFAMILY Chlorophyll a-b binding protein 13 165 - -
Dere06g1788 177 Gene3D Chlorophyll a/b binding protein domain 11 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1788 Dere-ChrDere06 32767532 32769908 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1788 3 162 Chloroplast and Mitochondria Gene Families AT3G61470 80.000 1.67e-92 268