Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1782 ATGGAAGCAAGAAAAGGGGCACTAGACAAGAAGGCGTCAAAAACCGAAGTCGTTCTGCAAATTCCTGAAATGGGGGAAGCTTTGTACTCGAAGAAAGAACCCCAGATGAATTCTTCGCCGGAGATAAGAAACGTGAGCCCAAAACCCAGCAAGCCCCCGAAAATTCCCGCAGAGACAGTAAACAAACGAAGGTTACTGTTAAGGTCGGAATTTTCGAAGCCAAAATCGAGACTGGTGGAGCCGCCATATCCGACAGACACAAACTTTGTTGAAGGAAAAAGCCAAATGGCAAGTCGGGATTCATCTAATAGGAATTCTCCTAACATGGTTTCGCCTATTCACAAAAGTACAGCAAATACTCCAAAGGGTAATCTTAGTACAGCTCCGGTTACCCCACGAACGCCAGTGATTGGCATAGCAGGAGAAGATGAAGATGATGATGAAGAAGTGTACAAAACTGCTGATCTTGAGGTGAGCAAGAGATCAGGTAAGAAAAAGTGGAAATCGGTGGCTTTGTTTGAATGGGTAGCTTTTATTTGCATTGTGGGTGCTTTGATATCGAGCTTGACCATCCATAAGTTGCAAGATAGTGTGATTTGGAGTTTGAAGCTGTGGAAATTGTGTGTTCTAGTGTTGGTTATCTTCTGTGGTAGAATAATCACAGAGTGGCTCATAAACATTCTGGTTTTCTTGTTTGAAAGGAACTACATATTCAAAAGGAAGGTTCTTTATTTTGTATATGGATTAAAGAAGAGTGTTCAGGCCTTCATTTGGTTAGCTCTGGTTCTTCTGACATGGTTTCTACTGTTCAATCATGGTGTTAAAAGATCCAAAAAGACTAAAAAAATTCTCAATTACATCACTAGAGCACTTGCTTCTTGCCTAATAGGAGCAGCTATATGGCTAGTGAAAACTCTGTTGATAAAGCTATTAGCTTCTTCTTTCCAATGCACCAGATTCTTTGACAGGATACAAGAATCAATCTTTCACCAGTACATTCTTCGGATTCTCTCGGGGCCTCCATTGATGGAGATGGCTGAAATAGTGGGGAAAACCCCGAGTACAGGTCAGCTAAGTTTTAGGACGCTGAACAGAAAGAATAAAGGGGAGAAAGAAGAGGTCATTGATGTCGACAAGTTAAAGAAGATGAAACAAGACAAGGTTTCTGCTTGGACAATGAGAGGATTAGTTAATGTAATAAGAAGTTCCGGGCTGTCCACCATATCTGATACACTCGAGAATTTTAACGACGAGGAAGGAGAGCAAAAAGACAAGGAAATTACCAGTGAGTGGGAAGCAAAAGCAGCTGCTTATAGAATTTTCAACAATGTAGCCAAGCCAGGAAATAAGTATATTGATGAGGAGGATCTGTTGAGATTTATGAATAAAGAGGAGGTGGAGAACGTGCTTCCTTTGCTTGAAGGAGCTGTTGAAACTGGAAAGATAAAGAGGAAGTCTCTCAAGAACTGGCTGGTAAAAGTTTACCTGGAGCGTAAATCACTGGTGCATTCCTTAAACGACACAAAAACAGCTGTTGATGAGTTGAACAAGCTGGCTTCAGTGCTTGTGCTCTTAGTAATCGTCATAGTTTGGCTGCTTTTAATGGGACTCTTAACAACTAAATTGCTTGTCTTCGTTTCGTCTCAGCTTTTACTCGCTGTGTTCGTGTTTGGCAACACAGCTAAAACTTTATTTGAGGCCATCATATTCGTCTTCGTCATGCACCCTTATGATGTCGGAGATCGTTGTGTCATTGATGGCGTACAGATGATAGTAGAAGAGATGAATATATTGACCACAGTGTTCTTGAGATATGATAACGAGAAGATATTCTATCCGAATTCAGTTCTAGCAACCAAACCAATCAGCAACTTTTACAGGAGCCCAGATATGAGTGATTCTGTTGAATTTGCTGTTGATGTTTCTACTTCCGTGGAGACCATTGGTGCTTTGAAAGCTAGAATAAAAGCATTCTTGGAGAGCAAGCCTCAGCACTGGCGTCCTGGGCACAGTGTGGTTGTTAAGAATATAGAGAACGTAAACAAGATGAATATGGGCCTGTATGTTACTCACACCATAAATTTCCAGAACTATGGAGATAAGAGCAGCCGAAGATCTGAGTTAGTGTTGGAGTTGAAGAAAATTTTTGAAGATCTTAATATTACATACCATCTTCTGCCACAAGATGTTCATCTCAGAAGTTATGAGGGACCAGAAGCAGTTCGACCAGTTTGGAGATGA 2241 0.411 MEARKGALDKKASKTEVVLQIPEMGEALYSKKEPQMNSSPEIRNVSPKPSKPPKIPAETVNKRRLLLRSEFSKPKSRLVEPPYPTDTNFVEGKSQMASRDSSNRNSPNMVSPIHKSTANTPKGNLSTAPVTPRTPVIGIAGEDEDDDEEVYKTADLEVSKRSGKKKWKSVALFEWVAFICIVGALISSLTIHKLQDSVIWSLKLWKLCVLVLVIFCGRIITEWLINILVFLFERNYIFKRKVLYFVYGLKKSVQAFIWLALVLLTWFLLFNHGVKRSKKTKKILNYITRALASCLIGAAIWLVKTLLIKLLASSFQCTRFFDRIQESIFHQYILRILSGPPLMEMAEIVGKTPSTGQLSFRTLNRKNKGEKEEVIDVDKLKKMKQDKVSAWTMRGLVNVIRSSGLSTISDTLENFNDEEGEQKDKEITSEWEAKAAAYRIFNNVAKPGNKYIDEEDLLRFMNKEEVENVLPLLEGAVETGKIKRKSLKNWLVKVYLERKSLVHSLNDTKTAVDELNKLASVLVLLVIVIVWLLLMGLLTTKLLVFVSSQLLLAVFVFGNTAKTLFEAIIFVFVMHPYDVGDRCVIDGVQMIVEEMNILTTVFLRYDNEKIFYPNSVLATKPISNFYRSPDMSDSVEFAVDVSTSVETIGALKARIKAFLESKPQHWRPGHSVVVKNIENVNKMNMGLYVTHTINFQNYGDKSSRRSELVLELKKIFEDLNITYHLLPQDVHLRSYEGPEAVRPVWR 746
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1782 746 Gene3D - 576 625 IPR023408 -
Dere06g1782 746 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 43 738 IPR016688 -
Dere06g1782 746 MobiDBLite consensus disorder prediction 88 131 - -
Dere06g1782 746 MobiDBLite consensus disorder prediction 57 75 - -
Dere06g1782 746 MobiDBLite consensus disorder prediction 28 140 - -
Dere06g1782 746 PIRSF Memb_At2g17000 5 745 IPR016688 -
Dere06g1782 746 Pfam Mechanosensitive ion channel 516 721 IPR006685 GO:0016020|GO:0055085
Dere06g1782 746 SUPERFAMILY Sm-like ribonucleoproteins 566 625 IPR010920 -
Dere06g1782 746 FunFam Predicted mechanosensitive ion channel 576 625 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1782 Dere-ChrDere06 32722992 32725799 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1782 10 732 Mechanosensitive Ion Channel Family AT5G12080 53.086 0.0 769