Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1752 ATGATTTCAGGTCGGTGTGCAGCTTGCAAGAATCAAAGAAGAAGGTGCCCTTCGGATTGCATTTTCTATCCCTATTTTCCTCCTGATGATCCTCAACGATTTGCTTGTGTTCACAGAATATATGGTGCCAGCAATGTTGGAAAAATGCTCCAGCAAATTCCATCCCATGTGCGAACAGAGGCAGCAGATACATTGTATTATGAAGCACGATGTAGGATAGATGATCCTGTGTACGGTTGTGTTAAGATTATCTCTCAGTTGCATCAAATAATACACAATGCAGAAAGTGAGCTAGCCAGAGTTCAAGCTCTTATTGCCATTCACAAGCTCCAAAGTCCACAGCTCGAAGCACATCAGCCAAACTTGGATAATGCCATGCCATCACAGACTAACATTGGGCAGTTTCAGTTTAATTCTTCAACTCAAGATCATGGGTTCAATTAG 444 0.4212 MISGRCAACKNQRRRCPSDCIFYPYFPPDDPQRFACVHRIYGASNVGKMLQQIPSHVRTEAADTLYYEARCRIDDPVYGCVKIISQLHQIIHNAESELARVQALIAIHKLQSPQLEAHQPNLDNAMPSQTNIGQFQFNSSTQDHGFN 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1752 147 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 125 - -
Dere06g1752 147 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Dere06g1752 147 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Dere06g1752 147 Coils Coil 84 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1752 Dere-ChrDere06 32368064 32368794 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1752 1 116 AS2 family AT3G26660 59.483 1.87e-49 153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere06g1752 LOB 4.6e-37 No_clan