Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1749 ATGGCAAACAACTTGACGGGGCAGCTGTTGGGCTCAGAGATACATGGATTCCATACATTGCAGGAGCTGGATGTTGGAAACATTATGGAGGAAGCAAGAAGCAGATGGCTTCGTCCCAATGAAATTCATGCCATACTCTGTAATTTCAAGTATTTCACCATCCATGTCAAGCCAGTGAATCTTCCCAAAAGTGGTACTATTGTATTATTTGACAGGAAGATGCTTAGGAATTTTCGTAAAGATGGGCACAATTGGAAAAAGAAAAAGGATGGGAAAACTGTTAAAGAAGCTCATGAGCACCTAAAAGTTGGTAATGAAGAAAGGATCCATGTATACTATGCACATGGCCAAGAAAATCCAAGCTTTGTTCGCAGATGTTATTGGTTGCTTGATAAGAGTCTGGAACATATAGTCCTTGTTCATTATCGCGAAACACAGGAGTTGCAAGGTTCTCCAGTCACACCTGTATATTCGAATTCTAGTTCTCCCTCTGATCCGACAACACCATGGGTATTACCAGAAGAATTAGATTCTGGGACCAACAAGGCATATTCTGGGGAGCTAAATGATGATGAATATGTCAAAAGTCACGAGCTGAGGCTTCATGAGATTAATACGCTAGAATGGGATGACCTAGTGGTTACAAATGATCTTAACACCTCTACTTCTTCTACTCCTACTGGAGGAAAGATCCCATATTTTCAACAAGAAAAGCAAATTTTACTCAATAGAAATTCAAGCAGGACAGTGGACAGTCAAGTAAATTCAAATTCACTGAGGGAACATTCGGTCGCTGGAGGTGGTGGCAAGTCCTTGGATATTATTATCAATGATAGTCTGCAAAGCCAGGACAGCTTTGGAAAATGGATAAGCCACATGATGTCTGATTCACCATGTTCTATGGATGACTCAGGTCTTGAATCCTCGATTTCATCTGTTCATGATTCATACTCTCCAGGAGTGGATCATCATCAACCTTCTCTGCCCGAACAAGTGTTTACTATCACTGATGTGTCTCCTGTCTGGGCGTGCTCCACTGAGAAAACAAAGATCCTGGTAACTGGATTTTTTCATGATGACTACCTGCACCTTGCAAAGTCCAATCTATTTTGTATCTGTGGGGAAGTCAGTGTTCCCACAGAAATTGTTCAAGTTGGTGTCTACCGATGCTGGGTATCACCGCTTTCCCCTGGTTTTGTGAATCTCTATATGAGCTTTGGCGGCCACAAGCCCATTAGCCAAGTTGTTAATTTTGAGTTTCGCACTCCTGTTTTACATGATCCTGCATCTTCTACAGAAGACCAGTACAGCTGGGATGAGTTTCGACTTCAGATGAGGCTTGCTTATTTGCTTTTTGCTACACAGAAGAGCCTTGACATTACCTCTAGCAAAGTATCGCCCAGTGCACTGAAGGAGGCTAAGAAATTTGTCTCCAAAACATCATATATTTCCAAAAGTTGGCAATACTTGATTAAGTCAACTGAAGACCAGAAAACTCCATTTCCACAAGCAAAAGACGCGTTGTTTGAAATTGCATTAAAGAATAAACTAAAGGATTGGCTGTTGGAAAGAATTATCTTAGGTTGTCAAACTACTGAATTTGATGCCCAAGGTCAAGGTGTAATTCATTTGTGCTCAATTTTGGGATATACATGGGCTGTTTCCTTATTTTCATGGTCAGGCTTTTCACTGAATTTCCGTGATAAATTTGGATGGACGGCTCTGCATTGGGCAGCTTATTATGGAAGGGAGAAAATGGTTGCAGCTCTATTGTCTGCAGGGGCAAGGCCAAATTTGGTCACAGATCCTACTCCTCAAAACCCTGGTGGTTGTACTGCTGCTGATCTTGCTCATATGAAGGGTTATAACGGTTTAGCAGCTTATCTTTCAGAAAAGTCTCTGGTTGGGCAGTTCAATGATATGAGTGTGGCAGGAAATATCAGTGGCTCACTGGAAAGTACTAGCACATGTGATCCAGTAAATTCTGAGAAGCTCAATGAGGATCAGCTGTACATGAAGGATACATTAACAGCTTACCGGACAGCGGCTGAGGCAGCAGCACGTATACAAGCTGCATTTAGGGAGCACTCACTAAAATTACGAACCGGTTCAGTTGAACTTTTCAGTCCAGAGGCTGAAGCACGGCAAATAGTTGCAGCAATGAAGATTCAACATGCCTTCCGCAACTTTGAGTCAAGGAAGTGTATGACAGCTGCTGTTCGCATCCAGTATACCTTCCGTACGTGGAAGATGCGTAGAGAATTTCTCCATAAACGTCGTCAGGCAATTAAAATTCAGGCTGCTTTCCGGGCCTTCAAAGAGCGGAAGAACTACCGTAAAATTATCTGGTCTGTTGGAGTGGTTGAGAAAGCAATCCTGCGTTGGCGTTTAAAGAGACGAGGCTTCCGTGGGCTTCATGTCAATCCTGTCCATGGAGTGGTAGATCAGGAGGAGGAAACAGAGAGTGTTACAGAGGAGGACTTTTTCCGTACTGGCAGGAGACAAGCTGAAGAGCGTGTTGAGAGATGTGTAGTACGGGTTCAATCCATGTTCCGCTCTAAGAAAGCACAAGTAGATTATAGGAGGATGAAGCTGGCCCAAAATCAAGCAAAGCTGGAACTAGAATATGAAGAGCTCATCAATTCTGAAGTAGATATGGGAGTGAAGACATAG 2673 0.428 MANNLTGQLLGSEIHGFHTLQELDVGNIMEEARSRWLRPNEIHAILCNFKYFTIHVKPVNLPKSGTIVLFDRKMLRNFRKDGHNWKKKKDGKTVKEAHEHLKVGNEERIHVYYAHGQENPSFVRRCYWLLDKSLEHIVLVHYRETQELQGSPVTPVYSNSSSPSDPTTPWVLPEELDSGTNKAYSGELNDDEYVKSHELRLHEINTLEWDDLVVTNDLNTSTSSTPTGGKIPYFQQEKQILLNRNSSRTVDSQVNSNSLREHSVAGGGGKSLDIIINDSLQSQDSFGKWISHMMSDSPCSMDDSGLESSISSVHDSYSPGVDHHQPSLPEQVFTITDVSPVWACSTEKTKILVTGFFHDDYLHLAKSNLFCICGEVSVPTEIVQVGVYRCWVSPLSPGFVNLYMSFGGHKPISQVVNFEFRTPVLHDPASSTEDQYSWDEFRLQMRLAYLLFATQKSLDITSSKVSPSALKEAKKFVSKTSYISKSWQYLIKSTEDQKTPFPQAKDALFEIALKNKLKDWLLERIILGCQTTEFDAQGQGVIHLCSILGYTWAVSLFSWSGFSLNFRDKFGWTALHWAAYYGREKMVAALLSAGARPNLVTDPTPQNPGGCTAADLAHMKGYNGLAAYLSEKSLVGQFNDMSVAGNISGSLESTSTCDPVNSEKLNEDQLYMKDTLTAYRTAAEAAARIQAAFREHSLKLRTGSVELFSPEAEARQIVAAMKIQHAFRNFESRKCMTAAVRIQYTFRTWKMRREFLHKRRQAIKIQAAFRAFKERKNYRKIIWSVGVVEKAILRWRLKRRGFRGLHVNPVHGVVDQEEETESVTEEDFFRTGRRQAEERVERCVVRVQSMFRSKKAQVDYRRMKLAQNQAKLELEYEELINSEVDMGVKT 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1749 890 Pfam CG-1 domain 31 144 IPR005559 GO:0003677
Dere06g1749 890 ProSiteProfiles IQ motif profile. 758 782 IPR000048 GO:0005515
Dere06g1749 890 Pfam IQ calmodulin-binding motif 738 755 IPR000048 GO:0005515
Dere06g1749 890 Pfam IQ calmodulin-binding motif 760 779 IPR000048 GO:0005515
Dere06g1749 890 SUPERFAMILY Ankyrin repeat 510 632 IPR036770 -
Dere06g1749 890 SMART CG_1_2 28 146 IPR005559 GO:0003677
Dere06g1749 890 Gene3D Immunoglobulins 329 424 IPR013783 -
Dere06g1749 890 Pfam Ankyrin repeats (3 copies) 512 599 IPR002110 GO:0005515
Dere06g1749 890 MobiDBLite consensus disorder prediction 152 185 - -
Dere06g1749 890 ProSiteProfiles Ankyrin repeat region circular profile. 570 598 - -
Dere06g1749 890 ProSiteProfiles IQ motif profile. 736 764 IPR000048 GO:0005515
Dere06g1749 890 ProSiteProfiles Ankyrin repeat profile. 570 602 IPR002110 GO:0005515
Dere06g1749 890 ProSiteProfiles IQ motif profile. 841 869 IPR000048 GO:0005515
Dere06g1749 890 SUPERFAMILY E set domains 334 421 IPR014756 -
Dere06g1749 890 SMART ANK_2a 570 599 IPR002110 GO:0005515
Dere06g1749 890 FunFam Calmodulin-binding transcription activator 5 329 425 - -
Dere06g1749 890 SMART iq_5 715 737 IPR000048 GO:0005515
Dere06g1749 890 SMART iq_5 757 779 IPR000048 GO:0005515
Dere06g1749 890 SMART iq_5 738 756 IPR000048 GO:0005515
Dere06g1749 890 SMART iq_5 839 861 IPR000048 GO:0005515
Dere06g1749 890 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 785 IPR027417 -
Dere06g1749 890 MobiDBLite consensus disorder prediction 152 168 - -
Dere06g1749 890 ProSiteProfiles CG-1 DNA-binding domain profile. 25 151 IPR005559 GO:0003677
Dere06g1749 890 Coils Coil 862 882 - -
Dere06g1749 890 Gene3D - 734 782 - -
Dere06g1749 890 FunFam calmodulin-binding transcription activator 5 500 640 - -
Dere06g1749 890 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 24 866 - -
Dere06g1749 890 Gene3D - 495 637 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1749 Dere-ChrDere06 32323428 32333258 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1749 28 873 CAMTA Transcription Factor Family AT3G16940 57.126 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Dere06g1749 Ank_2 8.4e-07 CL0465