Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1742 ATGCAATCTCTTAGAAGACGAAGGCCCAGTCACTGTGGGTGTCTCATCTGGCTAATTTTGGAGAAGAATTCAAAAAGGACTGTAGAACACGTGTCAATCAACAATGGGCACGTCATGCCTCAGAACAAACCACGAGATGTTGCTTTCGTCGCCGGGAGAGAAGATGACCGAAATTCTTCGCTGATATTTCCTGCTGCTTCTTCTTGCTGTTCATCTGATGAGATTTTCAGATGTAAAAAGAATGCCTTCATATGGGAAACATCTCAGCGAGCTTTAATTGGACAGGGAAAGAAAAAATCTTCAAAGCAGGGGAAAATTATGGATAGAAATTTGCCAGTGACATGGCCCTATGCGGTGGATGACGATGGTTTTGGATTAGGGCCAAGTGTTAGAGGAAGTAGTACTCATAGTTATGCTTCATCAGTTACAGATGATGATAGTCCTGGCTTCATTCCAACCAATAATGTTGTGTATTTAATGGAGGCTGCAACAAGAATTATCGAGCCTAGACCCCAAGGTACTATAAAGGTTAAAACACCTCAGATATCATCATCTACTGTGTCTTTGAAGGATAAAGATCTCAAAGAAAAAGTTGAAACTTCACAAAAAGGGCCTCAAATTGGGTCATCTTCAATGACGTCTAGAGTTCAAGGTTTGTCTTTTAATGGTGGTAGAAGTTCAGTGGGTCAGAAAGAACATCTTGAGGTCAAAACCAACCAGCCAATGAAGGTAAATGCTCAAAAGAATTTGTGCAAGAAATCTACTATTCAGAACTCTTTTGGCGTTCTTAGGCAAAATAATCAGAAACAGGATTGTTCAGTTGATAAGTACAAATTATCATCAAAGCCATCGTATTCCAATTCACAGTGTGGAAAAGTTCTGTCTGGAGATTCTTCTTATGGACATCATAGAAGCTCAAGTAGTAAATTTCTGGCAAAGCCTAAAGTTGGATCTAGGAAGTTGAGCTTAGAGAAGACAAAGGATCCTCCATTATATCGCTGCATTAAAAGAGTGTTGCTTGACTCAGATAGCACAAGATCTCCAATAGGATACAATGTTATAGGCCAAGATGCCTTAGGTATTCTTTTGGAACAGAAATTAAGGGAATTAACATATGGAGTTGAGACTTCTTGTGAGGACTCTTTCAAAGTAAAGCTACCTTCCATTGCTGCATCAAATTCAATAAATTTGATGTCTTCCCTAAATTCAGTTGAGCTCATTTCAAGATTACAACAACAGAAAGGACATGAATTACTATCCAAAGATAAATTATGCAGTGCACATGATTCTCTCACTAATCTCACAAAACCTTCCTTTTCAACTGAAAGTTGTTCATCTTCAATTGGTACAGATGGCACTAATAGCATGGAAGGAAGCAAGTTGTGCTCATCAGCTCATGCACAGGAAGTTCTTGGCTTGAATTTTTTGAAGTTTTATACTACAGAAGCAGATCTAGAGTTATCAGATTCAGCTTCCTCAGCTACTTTAAAGAAGCACACAGGCCTACTTTCTATTATGAAGTTTGAAAGATCAAGCACATCAGAGTTGAACTATGTGAATGATATATTGTGGAATGTGGAATCGATGTTTACGGACTTTGCCTTGGGTCGAGCACATGATATCATAGACCCCCATTTATTCAATTTGTTGGAAAGTTGA 1659 0.387 MQSLRRRRPSHCGCLIWLILEKNSKRTVEHVSINNGHVMPQNKPRDVAFVAGREDDRNSSLIFPAASSCCSSDEIFRCKKNAFIWETSQRALIGQGKKKSSKQGKIMDRNLPVTWPYAVDDDGFGLGPSVRGSSTHSYASSVTDDDSPGFIPTNNVVYLMEAATRIIEPRPQGTIKVKTPQISSSTVSLKDKDLKEKVETSQKGPQIGSSSMTSRVQGLSFNGGRSSVGQKEHLEVKTNQPMKVNAQKNLCKKSTIQNSFGVLRQNNQKQDCSVDKYKLSSKPSYSNSQCGKVLSGDSSYGHHRSSSSKFLAKPKVGSRKLSLEKTKDPPLYRCIKRVLLDSDSTRSPIGYNVIGQDALGILLEQKLRELTYGVETSCEDSFKVKLPSIAASNSINLMSSLNSVELISRLQQQKGHELLSKDKLCSAHDSLTNLTKPSFSTESCSSSIGTDGTNSMEGSKLCSSAHAQEVLGLNFLKFYTTEADLELSDSASSATLKKHTGLLSIMKFERSSTSELNYVNDILWNVESMFTDFALGRAHDIIDPHLFNLLES 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1742 552 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 341 552 - -
Dere06g1742 552 MobiDBLite consensus disorder prediction 184 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1742 Dere-ChrDere06 32243957 32249170 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1742 148 551 TRM (TON1 Recruiting Motif) Superfamily AT3G58650 27.495 1.02e-18 88.2