Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1741 ATGAGTGCATCAGAAAACCCTAACCCTCATATGTATAAGAAGAAATCTTCATCCTCTTCCTCTAATCCGATGCTATTCGGTTTCCCATTAACAGCAAGGTCTGGTAATGGTATTGTTCCATCAAGTGAGACTAGTTTTGAGAGTCTTAAGAGATTCAAATGCCATTTCTGTTGCCGGAAATTCTCCAATTCTCAAGCTCTGGGAGGACATCAAAATGCCCACAAAAGGGAACGCCGACAGGCTACCCTAGCCCATTACAACTCCCTCAAGCATCATCTTCATCCTCATCATCAACGCTTCACAGTCGCATCATCAGGACCGTCCCTTATACATCAACCTCCACATCATCACGATCATGAGCTCTTCAATGGACAAGTACAGAATGATGATGATGGTGTCGATCTTAGCTTGACTCTAGCCTGCAATAGTTCCAACTTCAGTGACAAGGACGCCTGA 456 0.443 MSASENPNPHMYKKKSSSSSSNPMLFGFPLTARSGNGIVPSSETSFESLKRFKCHFCCRKFSNSQALGGHQNAHKRERRQATLAHYNSLKHHLHPHHQRFTVASSGPSLIHQPPHHHDHELFNGQVQNDDDGVDLSLTLACNSSNFSDKDA 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1741 151 MobiDBLite consensus disorder prediction 1 21 - -
Dere06g1741 151 PANTHER ZINC FINGER PROTEIN GIS 31 117 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
Dere06g1741 151 ProSiteProfiles Zinc finger C2H2 type domain profile. 52 79 IPR013087 -
Dere06g1741 151 ProSitePatterns Zinc finger C2H2 type domain signature. 54 74 IPR013087 -
Dere06g1741 151 SUPERFAMILY beta-beta-alpha zinc fingers 50 79 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1741 Dere-ChrDere06 32230580 32231035 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1741 40 113 C2H2 Transcription Factor Family AT1G67030 46.250 3.78e-13 62.4