Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1716 ATGGCGACGGAGCTGTTGATGTCCGATGGCGGTCCCCGCTACGTTCAAATGCAATCGGAGCCGTCCGTGCCGATGTCGTCTTCTGCGTCGTTCCGGCTTGGCGGTGGCTCTGAGACCAATCGAATTTTCAATGAGTTGCCCGAAGCCACCATCGTCTCCGTCTCTCGTCCCGACGCCGGCGATATCAGTCCTATGCTTCTCACGTACACAATTGAGTTCCGTTATAAACAGTTCAAGTGGCAGTTAGTGAAGAAAGCTCCTCAAGTATTTTATTTGCATTTTACATTGAAGAAACGTGCCTTTATTGAGGAAATTCATGAGAAGCAAGAGCAGGTTAAAGAATGGCTTAACAATCTAGGAATAGGAGAAAACACTGCTATGGTGCAAGATGATGATGAAGGTGATGATGAAACTGTTCATCTACACCATGATGAAAGTGCTAAAGACAGAGATGTTCCATCTAGCGCTGCTCTACCAATCATACGGCCAGCCTTAGGAAGACAGCAGTCTATATCAGACAGAGCAAAGATTGCGATGCAAGGATATCTGAATCACTTCTTGGGAAATATCAATATTGTTAACTCTCCAGAGGTTTGCAAGTTTTTGGAGGTATCAAAGTTATCTTTCACACCTGAATATGGCCCTAGCCTGAAGGAAGATTTTGTGATGGTGAAGCATCTGCCAGAAATTCCCAAGGATGACAATTCCAGAAAATGTTGTATGTCTCGCTGTTTTAGTTGTTGTAATGACAACTGGCAAAAGGTTTGGGCTGTACTAAAACCTGGATTCTTGGCATTGCTGGCTGATCCATTTGATAGCCAACCTTTGGACATTATTGTTTTTGACGTACTACCTGCCTCAGATGGGAATGGGGATGGTCGTTTGTCCCTGGCAAAGGAAATAAAGGAACGAAATCCTTTACGCCATTCATTCAAGGTGACTTGTGGAAACCGAAGCATTAGGATAAGAGTAAAAAGTAGTGGTAAAGTTAAAGACTGGGTTGCTGCCATTAATGATGCCGGACTCAGGCCTCCTGAAGGATGGTGTCATCCTCACCGCTATGGTTCATTTGCTCCTCCAAGAGGCTTGGTTGAAGATGGAAGTCAGGCCCAGTGGTTTGTCGATGGTCGAGCAGCATTTGAGGCCATTGCTTCTTCAATTGAGGATGCAAAATCGGAGATATATATTTGCGGGTGGTGGGTGTGCCCAGAACTGTATTTACGGCGTCCTTTTGATTCTCATGCTTCATCAAGGCTTGATAGTTTGCTGGAAGCCAAAGCTAAGCAAGGGGTTCAGATTTACATTCTTCTTTACAAAGAGGTGGCTCTTGCTTTGAAAATTAACAGTGTTTATAGCAAGAGAAAGCTTCTTAGCATTCACGAAAATGTGAGGGTACTACGCTATCCTGACCACTTTTCTTCTGGTGTTTACCTGTGGTCACACCATGAAAAGCTGGTCATTGTTGATCACCATATTTGTTTTATTGGAGGACTGGATCTATGCTTTGGTCGTTATGACACATCTGAACACAAAGTGGGAGATTTCCCTCCTTTGATCTGGCCTGGGAAGGACTACTATAACCCTAGGGAATCTGAACCAAATTCATGGGAAGATACAATGAAAGATGAATTGGATCGTATGAAATATCCTCGAATGCCATGGCATGATGTTCACTGTGCCCTTTGGGGACCCCCTTGTCGTGACATTGCTAGGCATTTTGTTCAGAGGTGGAATTATGCAAAGAGGAACAAAGCTCCAAATGAGCAAGCAATACCATTACTTATGCCTCAGCATCATATGGTTATCCCACATTACTTGGGAGGCAGCAGAGAGATGGAGACTGAAAGCAAGAATACTGACACTCATAGAGGTATGAAGAGGGAAGATTCCGTTTCCTCATTATCCCAAGATATTCCTCTACTTATGACTGATGACTCTGATGGGATGGATGCTCCTGAAGGAGAGCCAACATTAAATAATTTAAGTTCCTTTTCACATCACATTGACCTGCCAAATAGGGTCAGCAATGGTCTTCCTTTCCCTTTTGGGAAGGCCAAAATTGAACCAATAGGTCCAGATACACCATTGAAGGGCTTTGTAGATAATCTTGACTCTCTGGATTATCATGGGAAGATGCTTGTGGATAGAGTGACTCTTGCTAGTATACATAACTCGGGTCCAGAATGGTGGGAATCACAAGAACGTGGCGACCAGGGATGCTTTACAGATGAATCTGGCCAAGTTGGTCCTCGTGCTTCCTGCCGTTGTCAGGTTATTCGGAGTGTCAGTCAATGGTCTGCTGGAACAAGCCAAACAGAAGAGAGCATCCATAATGCTTATTGCTCTCTTATTGAGAAAGCAGAATACTTTATTTACATTGAGAATCAATTTTTTATCTCAGGTCTTTCAGAAGATGACATGATACGAAATCGTGTTTTAGAAGCTTTATATCGACGGATTATGCGAGCTTACCATGACAACAAATCTTTTAGGGTTATAATTGTCATACCTCTCCTGCCTGGCTTCCAGGGAGGCCTGGATGATAGTGGGGCAGCATCTGTCAGAGCTATAATGCATTGGCAGTATCGAACCATTTGCAGAGGACAGAATTCTATATTACATAATCTATTAGATCTTCTTGGTTCAAAAATACATGATTACATCTCTTTCTTTGGCCTTAGGGCTTATGGTAGACTCTTTGATGGTGGTCCAGTGGCAACCAGCCAGGTGTATGTTCACAGTAAAATCATGATTGTTGATGACTGTACAACCTTGATTGGATCTGCTAATATTAATGATAGGAGTTTACTTGGTTCCAGAGATTCTGAGATTGGTGTTATTATCGAAGACAGAGAGTTGATTGATTCATTTATGGGTGGAAAATCATGGAAAGCAGGAAAGTTCTCTCTGACTCTACGGTTGTCCTTGTGGTCTGAACACTTAGGCCTGCAAGCAGGAGAGATCAATCAAATAATGGACCCTATCGCTGAGTCTACTTATAAGGATATTTGGATGGCAACAGCAAAGACAAATACCACAATTTACCAAGATGTCTTTTCTTGCGTACCTAATGATCTGATACACACCAGACTTGCTTTCAGACAAAGCACAGCTTTCTGGAAAGAAAAAATTGGCCACACTACCATTGATTTAGGAATAGCCCCTGGAAAATTAGAATCCTATCATAATGGAGGTATCAAGAAAACTGATCCTTTGGAGAGATTAGCATCAGTGAAGGGTCATCTTGTTTCATTTCCCTTGGAATTCATGTGTCAAGAAAATTTAAGACCTGCTTTTAATGAAAGCGAATACTATGCTACTCAAAATCCGTTCTCCCATGATGTTACCTCGCGTTCTTGTAATCTTGTCAAAATTAATGTGGCTCAGAATATTCAGGATCAGATCCAGTTCTATACGCCCACTAACTCACATGAAACTATACCTGCTGAAGCGACGATGCCTTTTCTGGCAACCAACAACCTTTTCCGGCGATGA 3495 0.4266 MATELLMSDGGPRYVQMQSEPSVPMSSSASFRLGGGSETNRIFNELPEATIVSVSRPDAGDISPMLLTYTIEFRYKQFKWQLVKKAPQVFYLHFTLKKRAFIEEIHEKQEQVKEWLNNLGIGENTAMVQDDDEGDDETVHLHHDESAKDRDVPSSAALPIIRPALGRQQSISDRAKIAMQGYLNHFLGNINIVNSPEVCKFLEVSKLSFTPEYGPSLKEDFVMVKHLPEIPKDDNSRKCCMSRCFSCCNDNWQKVWAVLKPGFLALLADPFDSQPLDIIVFDVLPASDGNGDGRLSLAKEIKERNPLRHSFKVTCGNRSIRIRVKSSGKVKDWVAAINDAGLRPPEGWCHPHRYGSFAPPRGLVEDGSQAQWFVDGRAAFEAIASSIEDAKSEIYICGWWVCPELYLRRPFDSHASSRLDSLLEAKAKQGVQIYILLYKEVALALKINSVYSKRKLLSIHENVRVLRYPDHFSSGVYLWSHHEKLVIVDHHICFIGGLDLCFGRYDTSEHKVGDFPPLIWPGKDYYNPRESEPNSWEDTMKDELDRMKYPRMPWHDVHCALWGPPCRDIARHFVQRWNYAKRNKAPNEQAIPLLMPQHHMVIPHYLGGSREMETESKNTDTHRGMKREDSVSSLSQDIPLLMTDDSDGMDAPEGEPTLNNLSSFSHHIDLPNRVSNGLPFPFGKAKIEPIGPDTPLKGFVDNLDSLDYHGKMLVDRVTLASIHNSGPEWWESQERGDQGCFTDESGQVGPRASCRCQVIRSVSQWSAGTSQTEESIHNAYCSLIEKAEYFIYIENQFFISGLSEDDMIRNRVLEALYRRIMRAYHDNKSFRVIIVIPLLPGFQGGLDDSGAASVRAIMHWQYRTICRGQNSILHNLLDLLGSKIHDYISFFGLRAYGRLFDGGPVATSQVYVHSKIMIVDDCTTLIGSANINDRSLLGSRDSEIGVIIEDRELIDSFMGGKSWKAGKFSLTLRLSLWSEHLGLQAGEINQIMDPIAESTYKDIWMATAKTNTTIYQDVFSCVPNDLIHTRLAFRQSTAFWKEKIGHTTIDLGIAPGKLESYHNGGIKKTDPLERLASVKGHLVSFPLEFMCQENLRPAFNESEYYATQNPFSHDVTSRSCNLVKINVAQNIQDQIQFYTPTNSHETIPAEATMPFLATNNLFRR 1164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1716 1164 SMART pld_4 908 935 IPR001736 GO:0003824
Dere06g1716 1164 SMART pld_4 477 504 IPR001736 GO:0003824
Dere06g1716 1164 Pfam PLD-like domain 781 957 IPR025202 -
Dere06g1716 1164 Pfam Phospholipase D Active site motif 477 504 IPR001736 GO:0003824
Dere06g1716 1164 CDD PLDc_vPLD1_2_yPLD_like_1 370 514 - -
Dere06g1716 1164 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 908 935 IPR001736 GO:0003824
Dere06g1716 1164 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 477 504 IPR001736 GO:0003824
Dere06g1716 1164 FunFam Phospholipase 742 962 - -
Dere06g1716 1164 MobiDBLite consensus disorder prediction 613 630 - -
Dere06g1716 1164 MobiDBLite consensus disorder prediction 129 148 - -
Dere06g1716 1164 MobiDBLite consensus disorder prediction 613 633 - -
Dere06g1716 1164 Gene3D Endonuclease Chain A 714 969 - -
Dere06g1716 1164 CDD PH_PLD 193 340 - -
Dere06g1716 1164 Gene3D Endonuclease Chain A 363 601 - -
Dere06g1716 1164 SUPERFAMILY Phospholipase D/nuclease 327 597 - -
Dere06g1716 1164 CDD PLDc_vPLD1_2_yPLD_like_2 768 952 - -
Dere06g1716 1164 Gene3D - 243 342 IPR011993 -
Dere06g1716 1164 PIRSF PLD_euk 48 628 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dere06g1716 1164 PIRSF PLD_euk 608 1112 IPR016555 GO:0004630|GO:0006654|GO:0048017
Dere06g1716 1164 Coils Coil 98 118 - -
Dere06g1716 1164 PANTHER PHOSPHOLIPASE D 168 1101 IPR015679 -
Dere06g1716 1164 SMART PH_update 216 344 IPR001849 -
Dere06g1716 1164 ProSiteProfiles PH domain profile. 251 342 IPR001849 -
Dere06g1716 1164 SUPERFAMILY Phospholipase D/nuclease 748 957 - -
Dere06g1716 1164 SUPERFAMILY PH domain-like 249 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1716 Dere-ChrDere06 31858412 31877950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1716 1 992 Phospholipase D Gene Family (Wang group) AT3G16785 72.682 0.0 1394