Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1713 ATGTGTGGAGGTGCTATTATCTCCGACTTCGTCTCCGAGAAGCGTGGTCGGAAATTGACCACCCAAGACCTGTGGTCCGAGCTCGACACCTTCTCTGATCTCCTTGGCTTCGACCCCACTTTCCTTTCTTCCGAACACCAGCCTACTCCCCTTGATGATCAAAAGCTCCCTCAAACTGCAGCCAACCAAGCAGTGACATGTGAAGAAGATAACAAGTCGGAGAAGAAAAGCGTGGGAGGGAAGGGATCTCAAAGGCCTCGCAAAAACGTGTACAGAGGAATCAGGCAAAGGCCATGGGGCAAGTGGGCCGCTGAGATAAGGGACCCACACAAGGGCATCCGTGTCTGGCTCGGTACCTTCAACACAGCCGAAGAAGCCGCCCGAGCCTACGACCAAGCCGCCAAGCGTATCCGCGGCGACAAAGCCAAGCTCAACTTCCCGCCTCAAACACCTCCGACTCCGACTCCGCCTCCGCCTCCGGCTGACATACCGGCTAAGAAGAAGCGCTGCCTTGGCTCCCCCGAGCCGACCCACCCCTCTCCGCCTTCACCCCAAAACGACGCCGTAAATCTGAAGCAGCAAATCTTAAACCTGGAATCGTTCCTGGGTCTGGAGAACAACAATAACGATAACATTACTGAGAAGCAACCGAGTGGAAGTGGCGGTACACTCACTGAGTGGGACCCCTTGGAGGAGCTGTGGATGCTGGACGACGTCGTTATGCATCACCTCCACCATAACCGTCACCTGAATGTCTAA 759 0.5547 MCGGAIISDFVSEKRGRKLTTQDLWSELDTFSDLLGFDPTFLSSEHQPTPLDDQKLPQTAANQAVTCEEDNKSEKKSVGGKGSQRPRKNVYRGIRQRPWGKWAAEIRDPHKGIRVWLGTFNTAEEAARAYDQAAKRIRGDKAKLNFPPQTPPTPTPPPPPADIPAKKKRCLGSPEPTHPSPPSPQNDAVNLKQQILNLESFLGLENNNNDNITEKQPSGSGGTLTEWDPLEELWMLDDVVMHHLHHNRHLNV 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1713 252 MobiDBLite consensus disorder prediction 147 164 - -
Dere06g1713 252 MobiDBLite consensus disorder prediction 139 188 - -
Dere06g1713 252 PANTHER DNA-BINDING DOMAIN 63 179 IPR044808 GO:0003700|GO:0009873
Dere06g1713 252 FunFam Ethylene-responsive transcription factor 2 89 149 - -
Dere06g1713 252 Pfam AP2 domain 90 139 IPR001471 GO:0003700|GO:0006355
Dere06g1713 252 PRINTS Ethylene responsive element binding protein signature 91 102 IPR001471 GO:0003700|GO:0006355
Dere06g1713 252 PRINTS Ethylene responsive element binding protein signature 113 129 IPR001471 GO:0003700|GO:0006355
Dere06g1713 252 MobiDBLite consensus disorder prediction 43 67 - -
Dere06g1713 252 SUPERFAMILY DNA-binding domain 90 148 IPR016177 GO:0003677
Dere06g1713 252 Gene3D AP2/ERF domain 90 148 IPR036955 GO:0003700|GO:0006355
Dere06g1713 252 CDD AP2 91 146 IPR001471 GO:0003700|GO:0006355
Dere06g1713 252 ProSiteProfiles AP2/ERF domain profile. 90 147 IPR001471 GO:0003700|GO:0006355
Dere06g1713 252 MobiDBLite consensus disorder prediction 43 93 - -
Dere06g1713 252 SMART rav1_2 90 153 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1713 Dere-ChrDere06 31822312 31823768 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1713 1 243 AP2-EREBP Transcription Factor Family AT3G16770 46.520 4.04e-61 191
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere06g1713 AP2 2.8e-15 CL0081