Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1712 ATGAATTCGAATTACGGCAAGCCCAATCAACCGAAAGCTTCATCTGTCTCACGGAACAACTTCAATTTCGACTTTGATCTCGGGATCGGATCGAATCGAGCCAAATCTCTCAACGAGCAGAAAAACCCGCAATCGTCGTATTCATACTCTTCTTCATCTTCTTCATATTCGTCTGCGCAACCCAGACCCGCGTGGCAACCGAACAAGCCATCATGGACTCACCAGCCGGCTCCCAATCTTGCGGCTCAGCCCGGGTTGCCGAGTGGACCCACTTCAATGGTAGGGGATATCTTTGGCAAGAGTTGGGGATCGACACCTTCGGGTTCGAGTTCGACTATTGGTGTCGCTAAGAAAGACCCTAATCTCTTCGGGGATTTGGTGAGCTCTGCTTTGGGGCAGAATCCTACGAGTAGCAATAATGCTCCTCTGAAAAATTCGACGCCTGTTTCGAAGGTATCAGGTACTGCATCGAACAAGAGTTCTTTTTCAATGGGAAATGTGGCTAATTCTTTGCCTAAAACTAGTAATACTGCGCAAAGTAGTGCAAGTTGGGGATCTTCTGGGTACAATAATACTAGTATGAGCGCTAATAAGAGCCCAAATCTTGGGGGTCCTTCAATGCGAAGTACGAATAGTGGTGGTTCAGCTGGAAGTGCAATGAATGCTAATAAAGATCCATTTAGCTCTTTGGCTGGATTTGGATCAAAACCATCTGGTAGTCTTAATTCAGCTGGAAAGGCCACAAAGAATAATAATACAGAGGATGATGGTTTTGGAGATTTCCAGAATGCTTCCAAACCAAGTTCCACCACATTCCCGTCAAGTAATTCTACAGCTGATAATATCAGTTTTACGGGATCTACCAATCTGAATCAGAACCCTGTACCGACATCTGGTGGTGGTGATCCTATGGATATGTTTTTCTCATCTTCCTCAGCTTCAGCTGGAAGTGCTACCGTGGCATCTGAAGGATTTGGAGGAAAACCAGCTTCTGAAATTGATGACTGGGGTTTGGATTCTGAGTTTGGTGGAGGGGGCCATGACGTGGGTGGTACAACCACTGAACTCGAAGGGCTCCCACCTCCTCCTGCCGGGGTATCTGGTTCCTCAGCAAAAGGTAAGGGGATGGAGAATTACAAGCAAGGGCAATTTGCTGATGCTATTAAGTGGCTGTCTTGGGCTGTCATCCTTCTTGAGAAAGCAGGAGATAATCCAGGCTTGGCAGAGGTTTTGACATGCCGGGCTTCATGTTACAAAGAAGTTGGGGAATATAAAAAAGCCGTAGCAGATTGTACGAAGGTGCTTGAAAACGATGACACTAATGTATCTGTCCTGGTGCAACGTGCTCTCTTATATGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTGAGAACTGTTCTGAAGATTGATCCTGGTAATAGAGTTGCAAGAAGTACCGTTCACCGGTTGACAAAGCTGGCCGATTAG 1473 0.4623 MNSNYGKPNQPKASSVSRNNFNFDFDLGIGSNRAKSLNEQKNPQSSYSYSSSSSSYSSAQPRPAWQPNKPSWTHQPAPNLAAQPGLPSGPTSMVGDIFGKSWGSTPSGSSSTIGVAKKDPNLFGDLVSSALGQNPTSSNNAPLKNSTPVSKVSGTASNKSSFSMGNVANSLPKTSNTAQSSASWGSSGYNNTSMSANKSPNLGGPSMRSTNSGGSAGSAMNANKDPFSSLAGFGSKPSGSLNSAGKATKNNNTEDDGFGDFQNASKPSSTTFPSSNSTADNISFTGSTNLNQNPVPTSGGGDPMDMFFSSSSASAGSATVASEGFGGKPASEIDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSGSSAKGKGMENYKQGQFADAIKWLSWAVILLEKAGDNPGLAEVLTCRASCYKEVGEYKKAVADCTKVLENDDTNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPGNRVARSTVHRLTKLAD 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1712 490 MobiDBLite consensus disorder prediction 1 26 - -
Dere06g1712 490 Pfam Tetratricopeptide repeat 443 474 IPR019734 GO:0005515
Dere06g1712 490 MobiDBLite consensus disorder prediction 127 225 - -
Dere06g1712 490 SUPERFAMILY TPR-like 372 480 IPR011990 GO:0005515
Dere06g1712 490 Gene3D Tetratricopeptide repeat domain 368 489 IPR011990 GO:0005515
Dere06g1712 490 MobiDBLite consensus disorder prediction 1 311 - -
Dere06g1712 490 MobiDBLite consensus disorder prediction 33 78 - -
Dere06g1712 490 MobiDBLite consensus disorder prediction 341 374 - -
Dere06g1712 490 SMART tpr_5 408 441 IPR019734 GO:0005515
Dere06g1712 490 SMART tpr_5 442 475 IPR019734 GO:0005515
Dere06g1712 490 SMART tpr_5 368 401 IPR019734 GO:0005515
Dere06g1712 490 MobiDBLite consensus disorder prediction 233 311 - -
Dere06g1712 490 PANTHER OS03G0340700 PROTEIN 1 490 - -
Dere06g1712 490 MobiDBLite consensus disorder prediction 102 116 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1712 367 485 Calmodulin-binding Proteins AT3G25230 31.250 1.36e-08 55.5