Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1702 ATGGTGAGGCTAGACAAAAAAGGCACAAACAAGAGCTTAGAGTGTTTATTGGACTCGGACAAGCCAGGAACCACGAAGAATAATACCACTGGTGCTAAGGAACTCAGACCCCAGAAGTCTATTCCTGGGCATGGCCTAGAGTTTGATAATCTCTCGTACAGTGTCATAAAGAAGCAGAAGAAAGATGGGGCTTGGATCAAGAAAGAGGCTTATCTTCTCCATGACATTTCTGGGCAAGCAATGAGGGGTGAGATTATGGCCATCATGGGGCCTAGCGGTGCCGGAAAATCCACCTTTCTTGATGCTTTGGCTGGTCGTATTGCACAAGGGAGCTTCGAAGGATCAGTTAGAATCGATGGAAAGCCCGTGACCACAAGCTACATGAAGATGGTGTCGTCATATGTCATGCAAGATGACCAGTTGTTTCCTATGTTGACAGTTTTTGAGACATTTATGTTCGCTGCTGAGGTCAGGCTTCCTCCTTCAATTTCCAGGCAGGAAAAGAAGAAGAGGGTTAATGAGCTCCTTGATCAGCTGGGCTTGCAGAGTGCAACACATACATATATTGGTGATGAGGGAAAAAGAGGAGTGTCAGGAGGAGAACGACGAAGGGTATCGATCGGCATAGACATCATCCATAAGCCCTCACTTCTGTTTCTTGATGAACCAACCTCAGGTCTTGATTCCACTAGTGCTTATAGTGTAGTGGAAAAGGTTAAGGACATTGCTCGAGGTGGTAGCATCGTCCTCATGACCATACATCAGCCTTCCTATCGAATCCAAATGCTCCTAGACCGAGTTACCATCCTTGCAAGGGGAAGATTGATATACATGGGAAAGCCAAGTGCACTTTCATCTCACCTTTCTGGGTTTGGAAGGCCAGTACCTGATGGTGAAAACTGTATAGAGTATCTTTTAGATGTCATAAAAGAATATGATGAATCAACAGTTGGGCTTGAACCTCTTGTTCTGTACCATCGTGATGGCCTCAAACCTGACCAAGTAGCCATGACACCCCTTTTCAAAACACCAAGGACACCTTACAAAAGGAACAGTACTACTACTACACCTGCGTCAAAGCACATGATCAGCCTCAAAAGCCAAGGGTTCACTGCTGGAACAACGAATCTTGATTCTACACAGTTTAGTTATAACATTAACAACCATGAAGATGAAGATGAAGATGATGATGAGGATTTCGATAACTCTCTCGGAAGGAGAAGTGTTCAAACATATAGGACTCATAACATGACCAGTGGTGTCTACCCTCGTTTGGCTTCTCAGTTCTACAAAGATTTCTCAGCCAAAGATTTCTCTGTTTGGCTCTACCATGGTGTGGTAGGAACCCCTCGTCGCCCTCCATCCTGGACTCCGGCAAGAACACCGGGTTGGACGCCGGCGAAAACTCCGATTTCGGGACCAAGAAGCACCATTTCAAATCAGTATTCAATGCCATATGAAGAGCCTCATCGTGCCAAAACTCCATCCATAGTTAGCCAATCCATTGCCTTGGACTCCTTTGCAAGTTCCTACGCACAGTTTGACATTGAAGTGCTTGATGAACCAAGCCTTGGACCAAAGTATGCGAATCCATGGCTTCGCGAGGTGGCAGTACTCTCATGGCGAACTGCTCTAAACGTGATTCGAACCCCAGAACTGTTCCTTTCTCGTGAAATTGTGCTTACAGTGATGGCTCTTGTCCTCTCCTCAATCTTCAAAAACCTTGGCCACCCTACCTTTAAAGACATCAATAGGCTTCTCAACTTCTACATCTTTGCAGTGTGCCTCGTCTTCTTCTCCTCCAACGACGCCGTCCCGTCGTTCATCTTAGAGAGGTTCATCTTCATAAGAGAAACCTCGCACAATGCTTACCGTGCCTCTTCATATGTGATTTCTTCATTGATTGTTTATCTCCCATTCTTCGCAATCCAAGGCTTCACATTTGCTGCTATTACCAAATTCATGCTTCACCTTAAAAGCAGCCTCTTATACTTCTGGTTGATTCTTTTTGCGTCTCTGATTACCACTAATGCTTATGTTATGCTAGTTAGTGCACTTGTTCCAAGTTATATTACAGGGTACGCAGTAGTGATAGCCACTACTGCTTTATTCTTTCTAACTTGCGGCTTCTTCCTCAAGAGAACTCAGATTCCTCCTTACTGGAAATGGCTTCACTATGTTTCTGCAATAAAGTACCCATTCGAGGCATTGTTGACTAATGAGTTCAAGAATGAAAAGTGCTATAGCGGGAACCCTGCAGATTTGTCGCCTGGACCATTGGGAGAGGTGAAGATTAGTGAAAGACATAGAAGTTTGAATCTTCCAAGTGATTGCTTGATAGGAAAAGATGTTCTGTTCACAATGGATGTTGAATTGGAAAACATTTGGTATGATATCTTGATCCTTCTGGCTTGGGGTGTTCTTTACAGGTTCTTCTTCTATTTGGTTTTGAGATTTTACTCTAAGAATGAGAGGAAATGA 2481 0.4418 MVRLDKKGTNKSLECLLDSDKPGTTKNNTTGAKELRPQKSIPGHGLEFDNLSYSVIKKQKKDGAWIKKEAYLLHDISGQAMRGEIMAIMGPSGAGKSTFLDALAGRIAQGSFEGSVRIDGKPVTTSYMKMVSSYVMQDDQLFPMLTVFETFMFAAEVRLPPSISRQEKKKRVNELLDQLGLQSATHTYIGDEGKRGVSGGERRRVSIGIDIIHKPSLLFLDEPTSGLDSTSAYSVVEKVKDIARGGSIVLMTIHQPSYRIQMLLDRVTILARGRLIYMGKPSALSSHLSGFGRPVPDGENCIEYLLDVIKEYDESTVGLEPLVLYHRDGLKPDQVAMTPLFKTPRTPYKRNSTTTTPASKHMISLKSQGFTAGTTNLDSTQFSYNINNHEDEDEDDDEDFDNSLGRRSVQTYRTHNMTSGVYPRLASQFYKDFSAKDFSVWLYHGVVGTPRRPPSWTPARTPGWTPAKTPISGPRSTISNQYSMPYEEPHRAKTPSIVSQSIALDSFASSYAQFDIEVLDEPSLGPKYANPWLREVAVLSWRTALNVIRTPELFLSREIVLTVMALVLSSIFKNLGHPTFKDINRLLNFYIFAVCLVFFSSNDAVPSFILERFIFIRETSHNAYRASSYVISSLIVYLPFFAIQGFTFAAITKFMLHLKSSLLYFWLILFASLITTNAYVMLVSALVPSYITGYAVVIATTALFFLTCGFFLKRTQIPPYWKWLHYVSAIKYPFEALLTNEFKNEKCYSGNPADLSPGPLGEVKISERHRSLNLPSDCLIGKDVLFTMDVELENIWYDILILLAWGVLYRFFFYLVLRFYSKNERK 826
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1702 826 Pfam ABC-2 type transporter 536 742 IPR013525 GO:0016020|GO:0140359
Dere06g1702 826 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 288 IPR027417 -
Dere06g1702 826 MobiDBLite consensus disorder prediction 14 41 - -
Dere06g1702 826 MobiDBLite consensus disorder prediction 21 35 - -
Dere06g1702 826 FunFam ABC transporter G family member 6 61 288 - -
Dere06g1702 826 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 26 813 - -
Dere06g1702 826 Pfam ABC transporter 73 225 IPR003439 GO:0005524
Dere06g1702 826 CDD ABCG_EPDR 46 279 - -
Dere06g1702 826 Gene3D - 45 291 IPR027417 -
Dere06g1702 826 SMART AAA_5 82 282 IPR003593 GO:0016887
Dere06g1702 826 ProSitePatterns ABC transporters family signature. 197 211 IPR017871 GO:0005524|GO:0016887
Dere06g1702 826 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 297 IPR003439 GO:0005524
Dere06g1702 826 MobiDBLite consensus disorder prediction 453 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1702 Dere-ChrDere06 31706398 31709175 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1702 83 286 Calmodulin-binding Proteins AT2G36910 26.066 4.83e-08 55.1