Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1701 ATGGTCTTCAAGGGCAGGTTCTTCTCCTCCAAGAAATCGGACTCTTCAAGCCCCGATGGGTCATCCAATAGTCCGCGATCACTCGGTTCCAATTCCCCCGGCAGATCCGAGAAGAGGAAGGTGAAATCAACTGCCAAAGAAGCCCGGATCGCTAACAGCAGCGATGGCGGCGGCGGCGGCGGAGGGGTTGGTGGCGCTGCCGTACGCCGTCAAACGCAACTGAAGGACGGGACAAAGAAGGATGGTAAAGGCAAGGAAAGTCACGCTCAAGCGGAGTCCCGGTTGACGACGTTGAAGCCAAGCACCGGGGCGGAATTGGGTTTGAGTTCGCTACCGAGTTCGGGGTCAAAGTCAAAGTCGTCGGCGGCGGCGGCGGCTGACGGGAAGGAATCTCCGTCGTCCTCGGTTTCTCCAATTTTGGCATCGTCCCTTGGATTGAACAGGATAAAGACGAGATCAGGACCGTTGCCGCAGGAGAGCTTTTTCGGGTTTAGAAGTGATAAGGGGTCGACGCTTGGTGCTAGTAACCTTTCTAGGCTTGGCGGTAATGGGAGTTCGGGGTCAGGAAGTGGTGGAAAGAAGAAGGATTTGGTGAATAGCAGAGTGGGGTTTCAAGAGAGTTCGGGCAGCGGCACTTGGGTTGATAATGGGAGTAATTCGGATTGTGTGTCGACTGGAAGTGCTCCGTCCAGGGACCAAAGCCCAAATGTATTGGCACGGTCGCGGCTACAGAACGGGGAATCATCATCCGCAGCAGGTAGACAGGACTCTTTGCAGTCTCAGTCTGGAGCCTTAAGAAGTGAAGATGTTTGCACTCCTGAGACTTCATATGACTTTGAAAACCCAAAGGAGTCTGAATCTCCTCGTTTCCAAGCTATATTACGTGTTACAAGTGCTCCCAGAAAGAGGTTTCCTGGAGATATTAAGAGTTTTTCCCACGAGTTGAATTCCAAAGGTGTCCGGCCTTTCCCGTTTTGGAAGCCTCGAGGGTTAAATAACTTGGAGGAGATCTTGGTTGTTATTCGGGCAAAATTTGATAAAGCAAAGGAAGAAGTGAACTCTGATCTGGCTATTTTTGCTGCAGACCTGATTGGAGTTCTTGAAAAAAATGCAGATTCTCATCCTGAGTGGCAGGAGACGATTGAGGACTTGCTGGTTTTGGCTAGAAGTTGTGCTATGACTTCACCTGGGGAGTTTTGGCTTCAGTGTGAAGGCATAGTTCAGGAGTTGGATGATCGACGTCAAGAACTTGCTCCGGGGATGCTTAAGCAACTTCACACCCGAATGCTTTTCATTCTTACTAGGTGTACCAGATTGTTGCAATTTCACAAGGAAAGTGGTTTGGCTGAGGATGAACATGTTTTCAATCTTCGGCAATCCAGAGTTCTGCATTCTGCTGAAAAACGTATTCCCCCTGGATTGGTAAGGGATGCAAAAAGTTCTAGTGCTGCAAAAGCCTCAAAGCCCTCAGCCAAAAAATTTTATAGTCAAGAGCAGCATATCTTGGATTGGAAGAAAGACGTTGCAAAGCCAGAGAATTTATCACTTCCTGCTGATAATGATAGTTCAAAACATTTAGAGTCTCCTTCAGGCAGGGATCGGATGGCTTCTTGGAGGAAATTTCCATCTCCACCAGCAAAAAGTTCAAAGGAAGCTGCTCAGTTGAAGGACCAAAACTATGGGAGGGTTGAACCTTCAAAGCTATCAAATAATAGGAGATCAACTTCTGATGTGGATCTATCTGCTGCCAAGCCATCTGAGCATCTTCCTGTCATTGACTCCCAGGAACATACTCTTAAGCACCAAACAAAAGTTTCTTGGGGCTACTGGGGTGATCAGCAGAATATTAGTGAGGAGAGTTCGATAATTTGTCGTATATGTGAGGAGGAAGTCCCTACTTCCAATGTTGAAGATCATTCAAGGATTTGTGCAATTGCTGATAGATGTGATCAGAAGGGTCTGAATGTCAATGAGCGTCTTGTCAGAGTTGCTGATACTCTAGAAAAGATGATGGAATTATGTATACAGAAGGATATTCAACAAGCAGTGGGAAGTCCTGATGTTGCAAAAGTGTCAAATTCAAGTATGACTGAAGAATCTGATGTTATCTCCCCAAAACTTAGTGATTGGTCTCGCAGAGGCTCAGAGGATATGCTAGACTGTTTCCCTGAAGCCGATAATTCTGCTTTTATGGATGATCTAAAGGCATTACCTCTTATATCATGTAAAACTCGTTTTGGTCCAAAGTCTGACCAAGGCATGACAGCATCATCTGCTGGGAGCATGACTCCTAGGTCGCCTTTAATGACCCCAAAGATGAGTCAGATTGACTTGCTCTTGGCTGGGAAGGGTGCTTATTCTGAACATGATGATATTCCGCAGATGAATGAACTTGCCGATATAGCACGATGTGTAGCAAATACACCTCTGGATGATGATCGCTCAATCTCATATTTAATATCTTGTCTTGATGATTTGCGGATTGTTGTAGACCGAAGGAAATTTGATGCACTTACTGTGGAGACCTTTGGAACTCGCATTGAGAAGCTGATACGGGAAAAGTATTTGCAGCTTACTGAGATGGTTGAAGACGAAAAGATAGACCTAGCAAGCACTGTAATTGAAGAAGATGCTCCCTTGGAAGATGATGTGGTTCGTAGCTTGAGAACGAGTCCTATCCATTCTTCAAAGGATCGTACAACTATTGATGACTTTGAGATTATAAAACCTATCAGTCGTGGGGCATTCGGACGGGTTTTCTTGGCTAAAAAGAGAACAACTGGGGATCTTTTTGCAATAAAGGTTCTCAAGAAGGCAGATATGATTCGTAAGAATGCTGTGGAAAGTATACTAGCAGAACGTGATATCTTAATCACAGTGCGCAACCCTTTTGTGGTTCGTTTCTTCTATTCTTTTACATGTAGTGAGAACCTGTACCTCGTCATGGAGTATCTTAATGGAGGTGACCTGTATTCATTATTAAGAAGTTTAGGTTGCCTAGATGAGGAAGTTGCTCGTGTATATATTGCCGAAGTGGTGCTAGCACTAGAATACTTGCATTCACTGCATATAGTTCATCGTGACTTGAAGCCTGACAATTTGTTGATTGCACATGATGGTCATATTAAGTTAACAGACTTTGGGCTATCGAAAGTTGGTCTCATCAACAGCACGGATGATTTGTCTGGTCCAGCAGTGAGTGGGACATCCCTACTTGGGGAGGATGAACCCCAGTTATCTACATCAGAGCATCAAAAGGAAAGGAGGAAGAAACGTTCTGCTGTGGGTACACCTGATTATTTGGCACCAGAGATACTTTTGGGAACTGGACATGGATATACTGCAGATTGGTGGTCTGTTGGTGTCATTTTATTTGAATTGCTGGTTGGCATTCCCCCTTTCAATGCAGAGCATCCTCAGACCATATTTGATAATATTCTTAATTGCAAGATACCTTGGCCCCAGGTGCCTGAAGAATTGAGTCATGAAGCAAAAGATCTTATTGATCGATTATTAACTGAAGATCCTAATCAGAGACTTGGAGCCAAAGGGGCATCAGAGGTAAAGCAACATGTTTTCTTTAAGGATATAAACTGGGACACACTTGCCAGGCAAAAGGCTGCATTTGTTCCTGCATCTGAGAGTGCTCTCGATACTAGTTATTTCACAAGTCGCTATTCATGGAATACCTCTGACGGTCTTGTATATGCGGGAAGTGATGTTGAGGATTCTAGTGATGCAGATAGTTTAAGTGGCAGCAGTAGCTGCGTGAGCAATCGTCGAGATGAAGTGGGAGATGAATGTGGGGGTCTGGCTGATTTTGAGTCAGGCTCATCTATCAATTACTCTTTCAGTAATTTCTCATTTAAGAATCTCTCGCAGCTTGCATCAATCAACTATGATCTTCTCACCAAGGGATGGAAAGACGATCCGTCTACGAATTCCAGTGCATAA 3954 0.4497 MVFKGRFFSSKKSDSSSPDGSSNSPRSLGSNSPGRSEKRKVKSTAKEARIANSSDGGGGGGGVGGAAVRRQTQLKDGTKKDGKGKESHAQAESRLTTLKPSTGAELGLSSLPSSGSKSKSSAAAAADGKESPSSSVSPILASSLGLNRIKTRSGPLPQESFFGFRSDKGSTLGASNLSRLGGNGSSGSGSGGKKKDLVNSRVGFQESSGSGTWVDNGSNSDCVSTGSAPSRDQSPNVLARSRLQNGESSSAAGRQDSLQSQSGALRSEDVCTPETSYDFENPKESESPRFQAILRVTSAPRKRFPGDIKSFSHELNSKGVRPFPFWKPRGLNNLEEILVVIRAKFDKAKEEVNSDLAIFAADLIGVLEKNADSHPEWQETIEDLLVLARSCAMTSPGEFWLQCEGIVQELDDRRQELAPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDEHVFNLRQSRVLHSAEKRIPPGLVRDAKSSSAAKASKPSAKKFYSQEQHILDWKKDVAKPENLSLPADNDSSKHLESPSGRDRMASWRKFPSPPAKSSKEAAQLKDQNYGRVEPSKLSNNRRSTSDVDLSAAKPSEHLPVIDSQEHTLKHQTKVSWGYWGDQQNISEESSIICRICEEEVPTSNVEDHSRICAIADRCDQKGLNVNERLVRVADTLEKMMELCIQKDIQQAVGSPDVAKVSNSSMTEESDVISPKLSDWSRRGSEDMLDCFPEADNSAFMDDLKALPLISCKTRFGPKSDQGMTASSAGSMTPRSPLMTPKMSQIDLLLAGKGAYSEHDDIPQMNELADIARCVANTPLDDDRSISYLISCLDDLRIVVDRRKFDALTVETFGTRIEKLIREKYLQLTEMVEDEKIDLASTVIEEDAPLEDDVVRSLRTSPIHSSKDRTTIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILITVRNPFVVRFFYSFTCSENLYLVMEYLNGGDLYSLLRSLGCLDEEVARVYIAEVVLALEYLHSLHIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTSLLGEDEPQLSTSEHQKERRKKRSAVGTPDYLAPEILLGTGHGYTADWWSVGVILFELLVGIPPFNAEHPQTIFDNILNCKIPWPQVPEELSHEAKDLIDRLLTEDPNQRLGAKGASEVKQHVFFKDINWDTLARQKAAFVPASESALDTSYFTSRYSWNTSDGLVYAGSDVEDSSDADSLSGSSSCVSNRRDEVGDECGGLADFESGSSINYSFSNFSFKNLSQLASINYDLLTKGWKDDPSTNSSA 1317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1701 1317 ProSiteProfiles AGC-kinase C-terminal domain profile. 1195 1299 IPR000961 GO:0004674|GO:0005524|GO:0006468
Dere06g1701 1317 MobiDBLite consensus disorder prediction 1066 1094 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 512 585 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 563 581 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 201 269 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 9 32 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 1079 1094 - -
Dere06g1701 1317 ProSiteProfiles Protein kinase domain profile. 905 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1701 1317 PANTHER SERINE/THREONINE-PROTEIN KINASE 588 1288 - -
Dere06g1701 1317 Pfam Protein kinase domain 905 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1701 1317 MobiDBLite consensus disorder prediction 1243 1262 - -
Dere06g1701 1317 Gene3D Transferase(Phosphotransferase) domain 1 989 1212 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 473 494 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 169 193 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 93 149 - -
Dere06g1701 1317 SUPERFAMILY Protein kinase-like (PK-like) 902 1228 IPR011009 -
Dere06g1701 1317 SMART serkin_6 905 1194 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1701 1317 Gene3D Phosphorylase Kinase; domain 1 903 1223 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 73 92 - -
Dere06g1701 1317 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1024 1036 IPR008271 GO:0004672|GO:0006468
Dere06g1701 1317 MobiDBLite consensus disorder prediction 1244 1259 - -
Dere06g1701 1317 FunFam probable serine/threonine protein kinase IREH1 903 992 - -
Dere06g1701 1317 MobiDBLite consensus disorder prediction 1 288 - -
Dere06g1701 1317 Coils Coil 331 351 - -
Dere06g1701 1317 CDD STKc_MAST_like 911 1199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1701 Dere-ChrDere06 31668260 31683913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1701 1 1311 AGC Kinase Gene Family AT3G17850 67.244 0.0 1682
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Dere06g1701 Pkinase 6.6e-66 CL0016