Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1698 ATGCTGCCTTATAGTCTCTCCATTTCGCTCATTCTCTTCCTCTTTTTACTTCCTCTAGCGAAACCAGATCTGGGTTCTGAGCGTCTCGCTCTCGTGTCTCTCCGTTCAGCTGTTGGAGGCCGAACCCTTTTCTGGAAAGTTTCTGAGCAGAGTCCCTGCAAGTGGGCCGGTGTTCAATGCAAAAACGACCATGTCGTCGAGCTTCATCTTCCGGGTGTTGCTCTTTCGGGCTCAATACCCACTGGCATTTTCGGCAAGTTGACTCACCTTCGGACTCTCAGCTTGCGTTTCAATGCATTGAGGGGTGGGCTTCCTGTGGATCTCGCTTCTTGCGTAAATCTTCGCAACCTTTACTTGCAGCAAAATTTGCTGTCTGGGGAAATCCCAGAATTCTTGTTCACTTTACCTGACTTGGTTCGGCTTAATTTGGCGTCCAACAATTTTTCCGGTACGATTCCGTTGGGTTTCAACAATTTGACGAGGTTGAGGACTTTGTTCCTCGAAAACAACAACCTCTCCGGCGCCATCCCTGACTTAAATCTTGTGAAGCTTGAACAATTCAATGTTTCAAACAATATGCTTAATGGCTCAGTGCCAGAAAAGTTACAAACATTTTCTAAAGATTCATTTCTAGGAAATTTGCTTTGTGGGAAACCCCTTAATCTTTGTCCAGGAGATGTAAATGGAACTGTAACTGGAAATGGAAATGCTACTTCTCCGACGGCTGAAATTGAAAACAATGAGGGAAACATGAAGAAGAAGAAGAAATTGTCAGGTGGTGCCATTGCTGGAATCGTTGTGGGCTCTGCGGTGTGTCTTCTGTTTATTCTTTTCGCTTTGATCATACTGTGCCGTAAAAGGAGCAATCAAAAGGCGAGGTCTCTCGACAGTTCAACTGAGAAGCATCCTGAAGTGGAAAATCCGGGCCAAAAATCGGTTCCTGACGTAGAGAACGGTGCACGCAGTAATGGGTACTCGGCAGCGGCGGCAACGGCAGGGAACAACAGTGGAGCGAAGAAGTTGGTGTTTTTTGGTAAATCGCCAAAGGTGTTTGATCTTGAGGATTTGCTTAGAGCTTCTGCAGAGGTTTTGGGTAAAGGTACATTTGGGACAACCTATAAGGCGGTTCTGGAGATTGGACCAGTGGTGGCTGTGAAGAGGCTGAGGGATGTGACAATTTCTGAGAAAGAGTTCAAGGAGAAGATTGAAGCAGTGGGAGCAATGGATCATGAGAATTTGGTCCCTCTCAAGGCTCACTATTATAGCAGTGACGAAAAGCTTCTTGTCTACGATTACATGCCCATTGGAAGCTTATCTGCACTTTTGCATGGAAATAAAGGGGCAGGTAGGACACCACTGAATTGGGAAGTCAGATCAGGCATTGCTCTTGGAGCTGCTAGAGGCATTGAGTACTTACATTCACAAGGGACTAACGTTTCTCATGGAAACATAAAGTCATCCAACATCCTCCTCACCAGGTCCTTTGATGCCAGAGTATCTGATTTTGGCCTTGCTCACCTTGCTGGTCCCTCCTCCACTCCCAACCGGGTTGCTGGCTACCGTGCGCCGGAGGTAACCGATCCTCGCAAGATATCTCAGAAGGCAGATGTCTACAGCTTTGGTGTGTTGCTCTTGGAACTTCTCACCGGAAAGGCTCCAACACATGCTCTCTTAACTGAGGAAGGAGTAGACCTCCCTAGATGGGTTCAATCTGTTGTAAGAGAAGAGTGGACCTCAGAGGTCTTTGATCTTGAGCTCCTCAGGTATCAGAATGTTGAGGAAGAGATGGTTCAGCTGTTGCAGCTTGCAGTAGATTGTGCAGCCCCATACCCAGATAAGCGCCCTTCAATGTCTGAAGTGACAAAGCGCATTAAAGAGCTACGTGGGACTAGCTTGAAAGATGATCAAGACCAAATCCAACACTCTGAGCTGATCAAGGATTTAGATGATGTATCTTCTCACTGA 1965 0.4672 MLPYSLSISLILFLFLLPLAKPDLGSERLALVSLRSAVGGRTLFWKVSEQSPCKWAGVQCKNDHVVELHLPGVALSGSIPTGIFGKLTHLRTLSLRFNALRGGLPVDLASCVNLRNLYLQQNLLSGEIPEFLFTLPDLVRLNLASNNFSGTIPLGFNNLTRLRTLFLENNNLSGAIPDLNLVKLEQFNVSNNMLNGSVPEKLQTFSKDSFLGNLLCGKPLNLCPGDVNGTVTGNGNATSPTAEIENNEGNMKKKKKLSGGAIAGIVVGSAVCLLFILFALIILCRKRSNQKARSLDSSTEKHPEVENPGQKSVPDVENGARSNGYSAAAATAGNNSGAKKLVFFGKSPKVFDLEDLLRASAEVLGKGTFGTTYKAVLEIGPVVAVKRLRDVTISEKEFKEKIEAVGAMDHENLVPLKAHYYSSDEKLLVYDYMPIGSLSALLHGNKGAGRTPLNWEVRSGIALGAARGIEYLHSQGTNVSHGNIKSSNILLTRSFDARVSDFGLAHLAGPSSTPNRVAGYRAPEVTDPRKISQKADVYSFGVLLLELLTGKAPTHALLTEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAPYPDKRPSMSEVTKRIKELRGTSLKDDQDQIQHSELIKDLDDVSSH 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1698 654 ProSitePatterns Protein kinases ATP-binding region signature. 364 386 IPR017441 GO:0005524
Dere06g1698 654 PANTHER OS05G0588300 PROTEIN 9 634 - -
Dere06g1698 654 Pfam Protein kinase domain 361 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1698 654 Pfam Leucine rich repeat N-terminal domain 26 60 IPR013210 -
Dere06g1698 654 FunFam Probable inactive receptor kinase At1g48480 433 636 - -
Dere06g1698 654 Gene3D Ribonuclease Inhibitor 134 220 IPR032675 -
Dere06g1698 654 MobiDBLite consensus disorder prediction 293 308 - -
Dere06g1698 654 Gene3D Ribonuclease Inhibitor 30 133 IPR032675 -
Dere06g1698 654 Gene3D Phosphorylase Kinase; domain 1 325 432 - -
Dere06g1698 654 ProSiteProfiles Protein kinase domain profile. 358 644 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1698 654 FunFam Probable inactive receptor kinase RLK902 24 180 - -
Dere06g1698 654 SUPERFAMILY L domain-like 35 205 - -
Dere06g1698 654 Pfam Leucine rich repeat 77 124 IPR001611 GO:0005515
Dere06g1698 654 MobiDBLite consensus disorder prediction 293 320 - -
Dere06g1698 654 FunFam pollen receptor-like kinase 1 327 432 - -
Dere06g1698 654 Gene3D Transferase(Phosphotransferase) domain 1 433 652 - -
Dere06g1698 654 SUPERFAMILY Protein kinase-like (PK-like) 362 624 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1698 Dere-ChrDere06 31662120 31664670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1698 23 638 Receptor kinase-like Gene Family AT1G48480 63.233 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Dere06g1698 Pkinase 3e-38 CL0016