Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1692 ATGGCTCTCGTTCGCGACCGCCGCCACATTAACCTCCGCCTCCCCCTACCGGAAGCCTCCGAGCGGCGCCCTAGCTTTCCCCTCCCCTTCCCGGCCACTTCCACTTCCTCTGTCTCTTCCACCGCCGATATCGCTCCCAGCGACATTGAAAAGCTCCAAGTTCTTGGCCACGGCAATGGCGGCACAGTCTACAAGGTCCGCCACAAGCGCACCTCCGCGATCTACGCCCTGAAGGTCGTCCACAGCGACTCCGATCCGATGACGCGGAGGCAAATCCGTCGAGAGATAGACATCCTCTGCCGGACGGACTCGCCGTACGTTGTCCAGTGTCACGGCTTCTTCGAGAAGCCGTCCGGCGAAGTGGCGATCGTGCTGGAGTACATGGATTTGGGCACTCTGGACACGCTGCTGAAGAAGAACGGCACCTTCTCTGAGCCACAACTCGCAGCGGTGGCGCGTCAGGTTCTCAACGGGCTGAGCTACCTCCACGCGCACAAGATCATCCACCGCGACCTCAAGCCCTCGAATCTGCTGGTAAATAAGAATATGGAAGTGAAGATCGGCGATTTCGGAGTGAGCAAGGTCATGTGCCGCACGCTGGACGCGTGTAATTCATACGTCGGCACGTGCGCGTACATGAGCCCGGAACGGTTCGACCCGGATAGGTATGGCGGGAATTATAACGGGTATGCGGGTGACATATGGAGCTTGGGTCTCACGTTGTTTGAGCTGTATGTGGGTCATTTCCCGTTTCTTCCGGAGGGTCAGAGACCCGATTGGGCCACTTTGATGTGTGCCATTTGTTTCGCCGATCCACCGGCCTTGCCGGAGTCCGCGTCCGGCGAGTTTCGGAGTTTTGTGGAGTGTTGCTTGAAGAAGGAATCCAGTGAGAGGTGGACGGCGCCTCAGCTTTTGACCCACCCGTTTTTGCGTCAACAATGA 942 0.5828 MALVRDRRHINLRLPLPEASERRPSFPLPFPATSTSSVSSTADIAPSDIEKLQVLGHGNGGTVYKVRHKRTSAIYALKVVHSDSDPMTRRQIRREIDILCRTDSPYVVQCHGFFEKPSGEVAIVLEYMDLGTLDTLLKKNGTFSEPQLAAVARQVLNGLSYLHAHKIIHRDLKPSNLLVNKNMEVKIGDFGVSKVMCRTLDACNSYVGTCAYMSPERFDPDRYGGNYNGYAGDIWSLGLTLFELYVGHFPFLPEGQRPDWATLMCAICFADPPALPESASGEFRSFVECCLKKESSERWTAPQLLTHPFLRQQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1692 313 FunFam Mitogen-activated protein kinase kinase 1 31 129 - -
Dere06g1692 313 Pfam Protein kinase domain 50 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1692 313 CDD PKc_MAPKK_plant_like 47 312 - -
Dere06g1692 313 ProSitePatterns Serine/Threonine protein kinases active-site signature. 167 179 IPR008271 GO:0004672|GO:0006468
Dere06g1692 313 ProSiteProfiles Protein kinase domain profile. 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1692 313 Gene3D Phosphorylase Kinase; domain 1 31 129 - -
Dere06g1692 313 Gene3D Transferase(Phosphotransferase) domain 1 131 313 - -
Dere06g1692 313 SMART serkin_6 49 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1692 313 FunFam Mitogen-activated protein kinase 2 130 313 - -
Dere06g1692 313 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 36 312 - -
Dere06g1692 313 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Dere06g1692 313 ProSitePatterns Protein kinases ATP-binding region signature. 55 78 IPR017441 GO:0005524
Dere06g1692 313 MobiDBLite consensus disorder prediction 20 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1692 Dere-ChrDere06 31593128 31594069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1692 1 312 MAP Kinase Kinase Gene Family AT1G73500 64.856 1.63e-144 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Dere06g1692 Pkinase 5.7e-66 CL0016