Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1686 ATGGAAAAGAGGATGGTGCATGGCGGAGACGGACTGAGAAGAGAAGATGAGCAAGTGTCGGAGGACGGAGAGTACAGTTCCACCAGGAAGAGGTGCCGATGGTGGAGAAGGTTGAGGCCTCGTTTGGATTTGTGTTTCCGCGACGCCGATGCTAGTTGGACTGCCGGAGGTTTCGCGCACGGCGGAGGAGCCACCGATCTCCGGCGCGGATTCCTCATTCATCCCGATAACTGGTGGTACATTGTGTGGAAGCATTTCATTCTGATATGGGCAGTGTACTCTTCCTTCTTCACTCCCATGGAGTTTGGATTCTTCAGAGGGTTGCCGGAGGATATTTTCTTACTAGACATTGCCGGTCAATTCACTTTCCTCATCGACATCGTCGTCCGGTTCTTTGTCGCCTACCGTGACACCCACTCCTATTGCATGGTTTACAATCACAGTCAAATTGCCATGAGGTACCTGAAGTCTCGGTTTTTAGTTGATTTTCTGAGTTGTCTTCCGTGGGATTATATATACAAGGCTACTGGAAGGAAAGAGCCAGTCAGGTATCTTTTATGGATTAGGCTATGTCGAGCATGTAGAGTGACTGAATATTTTGAGAGGCTGGAGAAAAATATTAGGATCAATTACCTATTTACAAGAATAGTAAAGCTTCTTGTTGTTGAACTTTATTGCACGCACACGGCTGCCTGCATCTTCTACTATCTTGCTACCACTATGCCTCCATCCAAGGAAGGTTATACTTGGATAGGCAGCTTAAAGATGGGTGATTATAGCTATTCAGACTTTAGACATATCAGTCTCTGGAAGCGTTATGTGACTTCACTCTACTTTGCAATTGTTACCATGGCAACTGTTGGATATGGTGAGATACATGCAGTCAATGTCAGGGAAATGATATTTGTCATGATTTATGTCTCGTTTGATATGATTCTTGGTGCTTACCTTCTTGGTAATATGACAGCATTGATTGTGAAAGGATCAAAAACAGAAAGGTTTAGGGATAAAATGACTGATATTATCAAGTATATGAATAAAAACAACTTGGACAAGCAGATAAGTAAAGCGATAAAAGGCCATTTACGCTTACAGTATGATCGCAGTTACACTGAGGCTGCTGTTCTTCAGGATATTCCAGCCTCTATTCGCACAAAGATTTCTGTGAATTTGTATGAGCAGTTCATACAAAACGTTTCTCTTTTCAAGGGGTGCTCTTTGGGGTTCATTAAGCAGATTGCAATCAGAGTCCATGAAGAGTTTTTCCTCCCAGGAGAAGTGATTATGGAGCAAGGAACTGTAGCGGATCAGCTTTACCTTGTATGTCATGGTGAGCTGGATGAGATAAGGACAGAAGATGGTGATAAAGAAGAGATAATTAAGCATTTGGAAAACTATTGTACCTTTGGCGAGGTTTCGTTTCTTTGCAATACACCTCAACCTTACATGATACGAGCTAGTGAATTTTGCAAGGTTTTGCGACTTGATAAGCATTCCTTAATAGAAACACTGAAGATATATTTTGCGGATGGTCGGGTTATCTTGAACAATCTCCTTGAGGGAAAGGACTCCAGTCTTCAGCATAAGCTCTTGGAATCAGACTTCTCTTTGACTCTTGAAAACCATGAAACAGAGATGGCTATGAGAATGAATTGTGCTGCTTACGAGGGGAACATACACCTTTTGAAACGTTTGGTTGGATCAGGAGCAGATCCCAATAAGACTGATTATGATGGCAGATCATCCTTGCATATTTCTGCATCTAAAGGATATGTAGATATTGCTCATTTTCTTATTGAACGAGGAGTAATTGTCAATTTCTCAGACAAATTTGGGAATACTCCCTTGTTTGAAGCCATCAAGAATGGACATGAAGAAGTAGCTTCTATACTTGTGGATGCGGGGGCCACTCTTACCATTGATCATGCTGGAGATTTTCTCTGCATGACTGTTGCGAAGAAGAAGTTGGGCCTTCTCAAAATGGTTTTGGCATATGGTATTAATCCAAATTCCAGAAATTATGATCAGCGTACACCTCTTCACATAGCTGCCTCTGAAGGTTTGTGTACAATGGCTGAGTTGCTTCTAGAAGCAGGAGCAAGTGTTTTATCGAAGGACAGATGGGGAAATACACCGCTTGATGAAGCTCGTACAGGTGGAAATAGGAATATGATCAAAATGCTTGAAGTTGCAAAAGTTTCTCAGCTGGCTGAGTTGTCCAATAATATAGAAGAAACACGAGATGAAATTCCAAAAAAGAAATGCACAGTATTTCCCTTCCACCCGTGGGACCACAATGCAGATAGAAGAGAGGGAGTTGTCCTATGGGTTCCAAAAAGCATTGAAGAGCTTGTGAAGTTGGCAATGAAACATCTGAAATCTCCAAGTGCTTCCTGTATTTTATCAGAACATGGGGGTAAAATTCTTGATGTAGACATGATTAGCAATGATGATAAGCTATTTGTGGTGAGTGAAGCACGAAATGAAAGTGCATAA 2496 0.4191 MEKRMVHGGDGLRREDEQVSEDGEYSSTRKRCRWWRRLRPRLDLCFRDADASWTAGGFAHGGGATDLRRGFLIHPDNWWYIVWKHFILIWAVYSSFFTPMEFGFFRGLPEDIFLLDIAGQFTFLIDIVVRFFVAYRDTHSYCMVYNHSQIAMRYLKSRFLVDFLSCLPWDYIYKATGRKEPVRYLLWIRLCRACRVTEYFERLEKNIRINYLFTRIVKLLVVELYCTHTAACIFYYLATTMPPSKEGYTWIGSLKMGDYSYSDFRHISLWKRYVTSLYFAIVTMATVGYGEIHAVNVREMIFVMIYVSFDMILGAYLLGNMTALIVKGSKTERFRDKMTDIIKYMNKNNLDKQISKAIKGHLRLQYDRSYTEAAVLQDIPASIRTKISVNLYEQFIQNVSLFKGCSLGFIKQIAIRVHEEFFLPGEVIMEQGTVADQLYLVCHGELDEIRTEDGDKEEIIKHLENYCTFGEVSFLCNTPQPYMIRASEFCKVLRLDKHSLIETLKIYFADGRVILNNLLEGKDSSLQHKLLESDFSLTLENHETEMAMRMNCAAYEGNIHLLKRLVGSGADPNKTDYDGRSSLHISASKGYVDIAHFLIERGVIVNFSDKFGNTPLFEAIKNGHEEVASILVDAGATLTIDHAGDFLCMTVAKKKLGLLKMVLAYGINPNSRNYDQRTPLHIAASEGLCTMAELLLEAGASVLSKDRWGNTPLDEARTGGNRNMIKMLEVAKVSQLAELSNNIEETRDEIPKKKCTVFPFHPWDHNADRREGVVLWVPKSIEELVKLAMKHLKSPSASCILSEHGGKILDVDMISNDDKLFVVSEARNESA 831
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1686 831 ProSiteProfiles KHA domain profile. 754 831 IPR021789 -
Dere06g1686 831 SUPERFAMILY cAMP-binding domain-like 329 518 IPR018490 -
Dere06g1686 831 FunFam Potassium channel KAT2 389 525 - -
Dere06g1686 831 SMART ANK_2a 611 640 IPR002110 GO:0005515
Dere06g1686 831 SMART ANK_2a 675 704 IPR002110 GO:0005515
Dere06g1686 831 SMART ANK_2a 642 671 IPR002110 GO:0005515
Dere06g1686 831 SMART ANK_2a 545 574 IPR002110 GO:0005515
Dere06g1686 831 SMART ANK_2a 578 607 IPR002110 GO:0005515
Dere06g1686 831 SMART ANK_2a 708 737 IPR002110 GO:0005515
Dere06g1686 831 FunFam Potassium channel SKOR 81 326 - -
Dere06g1686 831 Gene3D Jelly Rolls 389 509 IPR014710 -
Dere06g1686 831 SMART cnmp_10 401 519 IPR000595 -
Dere06g1686 831 Gene3D Helix hairpin bin 329 388 - -
Dere06g1686 831 PRINTS EAG/ELK/ERG potassium channel family signature 317 326 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere06g1686 831 PRINTS EAG/ELK/ERG potassium channel family signature 225 235 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere06g1686 831 PRINTS EAG/ELK/ERG potassium channel family signature 273 290 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere06g1686 831 PRINTS EAG/ELK/ERG potassium channel family signature 116 126 IPR003938 GO:0005249|GO:0006813|GO:0016020
Dere06g1686 831 ProSiteProfiles Ankyrin repeat region circular profile. 675 707 - -
Dere06g1686 831 ProSiteProfiles Ankyrin repeat region circular profile. 611 638 - -
Dere06g1686 831 CDD CAP_ED 401 515 IPR000595 -
Dere06g1686 831 Pfam Ankyrin repeats (3 copies) 552 640 IPR002110 GO:0005515
Dere06g1686 831 ProSiteProfiles Ankyrin repeat region circular profile. 578 610 - -
Dere06g1686 831 SUPERFAMILY Voltage-gated potassium channels 74 326 - -
Dere06g1686 831 Gene3D - 641 741 IPR036770 -
Dere06g1686 831 ProSiteProfiles cAMP/cGMP binding motif profile. 401 504 IPR000595 -
Dere06g1686 831 Gene3D - 81 327 - -
Dere06g1686 831 Pfam KHA, dimerisation domain of potassium ion channel 753 822 IPR021789 -
Dere06g1686 831 Gene3D - 539 640 IPR036770 -
Dere06g1686 831 Coils Coil 736 756 - -
Dere06g1686 831 ProSiteProfiles Ankyrin repeat profile. 675 707 IPR002110 GO:0005515
Dere06g1686 831 ProSiteProfiles Ankyrin repeat profile. 578 610 IPR002110 GO:0005515
Dere06g1686 831 PANTHER POTASSIUM CHANNEL AKT1 62 827 IPR045319 GO:0005249|GO:0006813
Dere06g1686 831 ProSiteProfiles Ankyrin repeat profile. 611 643 IPR002110 GO:0005515
Dere06g1686 831 Pfam Ion transport protein 82 325 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Dere06g1686 831 Pfam Ankyrin repeats (many copies) 663 716 IPR002110 GO:0005515
Dere06g1686 831 SUPERFAMILY Ankyrin repeat 549 728 IPR036770 -
Dere06g1686 831 Pfam Cyclic nucleotide-binding domain 421 505 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1686 Dere-ChrDere06 31454746 31466688 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1686 12 707 Ion Channels AT5G37500 57.939 0.0 846