Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Dere06g1672 | ATGCTAGCGAGTAACTCTCCCTCTTCAGCTCCCACTTCGGAGCCCTTTCCCTGCTGTGACAATGGTGCTATCACTACCAACAAAAGAAAGAGAAGACCTGCAGGAACTCCAGATCCGGACGCTGAGGTGGTGTCGCTGTCGCCGAAGACGTTGCTGGAATCGGACCGATACGTGTGCGAGATCTGCAACCAGGGGTTCCAGAGGGACCAGAACCTGCAGATGCACCGGCGGCGGCACAAGGTGCCGTGGAAGCTGCTCAAGAGGGAGACTCCGGCGGCAAGGAAGCGGGTGTTCGTGTGCCCGGAGCCGACGTGCTTGCACCACGACCCGTGCCACGCGCTTGGCGATCTCGTCGGAATAAAGAAGCACTTCAGGAGAAAGCACAGTAACCACAAGCAATGGGTCTGCGAGAGATGCTCCAAAGGCTACGCAGTGCAGTCAGATTACAAAGCACATCTCAAGACCTGTGGCACCAGAGGCCACTCTTGCGATTGTGGTCGAGTATTCTCAAGGGTGGAGAGCTTTATCGAACACCAAGATGCTTGTAATCTGGGGCGGCTCCGGCCGGAATTGCATCCACCACAGCAGCAGCCGCCGGCGTGCTTGTCTCGGACCGCTTCGAGCCCGAGCCCGTCGAGCGAAACCAATTTCAGCACAGGTCCGAATTGGCATGGTCTAGTCTTGCCTAAGCCAACCGAACCCACATTCTTGAACCCTATCACCACCACTACTGCTGCTCATGAAACTTCATCCAACAACAACTATAAAGTCTGTCCAAACCTGGACCTTCAGCTGTCCACCACCACTTCCATTATTCCCATTGATATAACAGCTGCATCACCTAAGAAAGATGAAACCCGTTCTACCCACTTGCAGTTCTCAATTGGGTCATCGGAAGTCGGCGAGAAAAATGAATCAAATAGCTTCAATCGTCATAGAAATTCTCCCAAGGAGAGCTGTAATAGCAACGAGAAACCTGGAGGCGTAGGGATGAGGGTTCTTCATCAAGAGCAAGCACGTGATCAGTTGAGGCTTGCCATGGCGGAGAAGGCATATGCAGAGGAGGCGAGGAAGCAAGCGAAACGACAGATAGAAGTAGCGGAGAAGGAGTTTGCAAACGCCAAGAGGATCAGACAAGAAGCACAAGCCGAGCTAGACAAAGCCTATGCCTTGAAACAGCATGCCATAAAACAGATCAACTCCGTCATGCTTCAAATCACTTGCCATGCTTGCAAACGACAATATCATCAAGCACAAACGACAACAACCACGGGGGCTCCTCCTCCTCCGCCTCCTCCCCCGGACGAACACTCTTTGGTATTAAGCTACATGTCGTCTGCTATAACGACGGAAGGTGGCGAAGTAGAGAACTACACTAAAAATTATGGGAAAACTACTAACTCGTTATCTATCTAG | 1416 | 0.5212 | MLASNSPSSAPTSEPFPCCDNGAITTNKRKRRPAGTPDPDAEVVSLSPKTLLESDRYVCEICNQGFQRDQNLQMHRRRHKVPWKLLKRETPAARKRVFVCPEPTCLHHDPCHALGDLVGIKKHFRRKHSNHKQWVCERCSKGYAVQSDYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDACNLGRLRPELHPPQQQPPACLSRTASSPSPSSETNFSTGPNWHGLVLPKPTEPTFLNPITTTTAAHETSSNNNYKVCPNLDLQLSTTTSIIPIDITAASPKKDETRSTHLQFSIGSSEVGEKNESNSFNRHRNSPKESCNSNEKPGGVGMRVLHQEQARDQLRLAMAEKAYAEEARKQAKRQIEVAEKEFANAKRIRQEAQAELDKAYALKQHAIKQINSVMLQITCHACKRQYHQAQTTTTTGAPPPPPPPPDEHSLVLSYMSSAITTEGGEVENYTKNYGKTTNSLSI | 471 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 296 | 328 | - | - | |
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 1 | 15 | - | - | |
Dere06g1672 | 471 | Gene3D | Classic Zinc Finger | 119 | 191 | - | - | |
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 1 | 44 | - | - | |
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 198 | 222 | - | - | |
Dere06g1672 | 471 | Coils | Coil | 343 | 398 | - | - | |
Dere06g1672 | 471 | PANTHER | SERINE/THREONINE-PROTEIN KINASE RIO | 15 | 412 | IPR031140 | - | |
Dere06g1672 | 471 | Pfam | Zinc finger, C2H2 type | 57 | 79 | IPR013087 | - | |
Dere06g1672 | 471 | ProSiteProfiles | Zinc finger C2H2 type domain profile. | 57 | 79 | IPR013087 | - | |
Dere06g1672 | 471 | Gene3D | Classic Zinc Finger | 35 | 99 | - | - | |
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 419 | 439 | - | - | |
Dere06g1672 | 471 | SUPERFAMILY | beta-beta-alpha zinc fingers | 54 | 80 | IPR036236 | - | |
Dere06g1672 | 471 | MobiDBLite | consensus disorder prediction | 187 | 238 | - | - | |
Dere06g1672 | 471 | SMART | c2h2final6 | 134 | 161 | IPR013087 | - | |
Dere06g1672 | 471 | SMART | c2h2final6 | 98 | 128 | IPR013087 | - | |
Dere06g1672 | 471 | SMART | c2h2final6 | 57 | 79 | IPR013087 | - | |
Dere06g1672 | 471 | ProSitePatterns | Zinc finger C2H2 type domain signature. | 59 | 79 | IPR013087 | - | |
Dere06g1672 | 471 | FunFam | protein indeterminate-domain 12-like | 36 | 104 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Dere06g1672 | Dere-ChrDere06 | 31232394 | 31235256 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Dere06g1672 | 20 | 457 | C2H2 Transcription Factor Family | AT2G01940 | 53.863 | 1.43e-147 | 427 |