Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1671 ATGGATGGCGATAATGGCCTTGACATACGCAATTGGGGTTACTATGAACCCACAACGTCCTTTAAGAGCCATCTTGGGCTCCAGCTTATGTCGTCTGTGCCTGAAAAACCTATGCTTGGAGGACGCAATGCTGCAGTTTTATCTAGCACCAATGTGGCATTTCACCATAGGGATATTGGGATGCCACAAGCAACATACCCTATGGATTACATGAGGGATGCTTGGATTAGTCAGAGAGAGAAGTTTTTGAACATGATTCCTACGAACCCAGCAAACTACGCTGTTATTCCTGAGACATCTTCAGCCCATCATATGCAGTTGATTCAACCGCCTAACTTATTGAAGGAAGAAAGACCGGTGGAAGAGGCACCTGTTGAGAAGGCCAACAGCAGTAGTAAGAAAAGGCAGGGGTCCAAGGTACCCAAATCTCCTAAGGCAAAGAAGCCCAAGAGAGGACCTCGTGCACCAAAGGATGAGAATTCTCTTTCAGTTCAACGAGCAAGGACTGCAAAGAAAACTACTGAAATTGTAATAAATGGGATTGATTTGGATATTTCCAGTATTCCTATACCTGTTTGTTCATGCACTGGGACTCCTCAACAGTGTTATAGATGGGGCTCTGGTGGGTGGCAGTCTGCTTGTTGCACAACAGGCATGTCAATGTATCCATTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGTATCGGAGCATTTAAGAAAGTCTTGGAGAAACTTGCTGCCGAGGGTTATAACTTTTCCAATCCAATTGATTTGAAGACTTATTGGGCAAAACATGGTACCAACAAGTTTGTCACTATCAGTTTGTGGGAATTCAATCTTGTGGTTGTTGGTTCTAATTGGGAACTAGCAAATGAGACCTTATTAAATATATTTGGCAGGAAGTTTTCTGTCCATAAACCTATGCCTCTGGTGAATGAATGCTGCTGCCAAGACAGCAAGAGAAGGAAGAAGGGGGACGGGTTTTCTATGGTGAATTTAATGGCAGACTATTGTGGGTTGAAGGGTTATTCTGTATATACTTAA 1065 0.4366 MDGDNGLDIRNWGYYEPTTSFKSHLGLQLMSSVPEKPMLGGRNAAVLSSTNVAFHHRDIGMPQATYPMDYMRDAWISQREKFLNMIPTNPANYAVIPETSSAHHMQLIQPPNLLKEERPVEEAPVEKANSSSKKRQGSKVPKSPKAKKPKRGPRAPKDENSLSVQRARTAKKTTEIVINGIDLDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTISLWEFNLVVVGSNWELANETLLNIFGRKFSVHKPMPLVNECCCQDSKRRKKGDGFSMVNLMADYCGLKGYSVYT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1671 354 SMART GAGA_bind_2 1 281 IPR010409 -
Dere06g1671 354 PANTHER - 1 280 IPR010409 -
Dere06g1671 354 Pfam GAGA binding protein-like family 1 280 IPR010409 -
Dere06g1671 354 MobiDBLite consensus disorder prediction 115 133 - -
Dere06g1671 354 MobiDBLite consensus disorder prediction 113 169 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1671 Dere-ChrDere06 31214150 31215477 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1671 1 280 BBR or BPC Transcription factor family AT2G01930 51.186 5.08e-93 277
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dere06g1671 GAGA_bind 6.7e-112 No_clan