Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1664 ATGGATGGGGATAATGGTCTTGACATACGCAATTGGGGTTACTATGAACCCACAACGTCTTTTAAGAGCCATCTTGGGCTCCAGCTTATGTCGTCTATGCCTGAAAAACCTGTGCTTGGAGGACGCAATGCTGCAGTTTTATCCGGCACCAATGTGGCATTTCACCATAGGGACATTGGTATGCCACAAGCAACATACCCTATTGATTACATGAGGGATGCTTGGATTAGTCAGAGAGAGAAGTTTCTGAACATGATTCCTTCGAACCCAGCAAACTATGCTGTTATTCCCGAGACATCTTCAGCCCATCATATGCAGTTGATTCAGCCGCCTGACTTATCGAAGGAAGAAAGACCGGTGGAAGAGGCACCAGTTGAGAAGACCAACGGCACTAGTAAGAAAAGGCAGGGGTCCAAGGTGCCCAAATCTCCTAAGGCAAAGAAGCCCAAGAGAGGACCTCGTGCACCAAAGGATGAGAACACTCTTTCAGTTCAAAGAGCAAGAACTGCAAAAAAAACTACTGAAATTGTAATAAATGGGATTGATATGGATATTTCCAGTATTCCTATTCCAGTTTGTTCATGCACTGGGACGCCTCAACAGTGTTACAGATGGGGCTCTGGTGGGTGGCAGTCTGCTTGTTGCACAACAGGCATGTCAATGTATCCATTGCCTATGAGTACCAAGCGGCGTGGTGCTAGGATAGCTGGAAGGAAAATGAGCATAGGAGCATTTAAGAAAGTATTAGAGAAACTTGCAGCTGAGGGTTATAACTTTTCTAATCCAATTGATTTGAAGACTTATTGGGCAAAACATGGTACCAACAAGTTTGTCACTATCAGGTAG 846 0.448 MDGDNGLDIRNWGYYEPTTSFKSHLGLQLMSSMPEKPVLGGRNAAVLSGTNVAFHHRDIGMPQATYPIDYMRDAWISQREKFLNMIPSNPANYAVIPETSSAHHMQLIQPPDLSKEERPVEEAPVEKTNGTSKKRQGSKVPKSPKAKKPKRGPRAPKDENTLSVQRARTAKKTTEIVINGIDMDISSIPIPVCSCTGTPQQCYRWGSGGWQSACCTTGMSMYPLPMSTKRRGARIAGRKMSIGAFKKVLEKLAAEGYNFSNPIDLKTYWAKHGTNKFVTIR 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1664 281 Pfam GAGA binding protein-like family 1 281 IPR010409 -
Dere06g1664 281 PANTHER - 1 281 IPR010409 -
Dere06g1664 281 SMART GAGA_bind_2 1 281 IPR010409 -
Dere06g1664 281 MobiDBLite consensus disorder prediction 110 133 - -
Dere06g1664 281 MobiDBLite consensus disorder prediction 109 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1664 Dere-ChrDere06 31149056 31149901 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1664 1 281 BBR or BPC Transcription factor family AT2G01930 52.703 4.32e-98 287
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Dere06g1664 GAGA_bind 1.7e-112 No_clan