Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1662 ATGAATGCTTCGACGACGAGGAAGAAGATTCAGCGTAAGTGTAAGATCAGAGGGTACACTCTCAAAGTAGACGCTCTTGATGAGATCCTTTCCTTCGTCTCTCGATTTGATGCCCCTGATGAAGACGAAGCCATCGATCTCCTCCTCGATCAGCTCGAACACGAATCTTTGAAATCTACTATAATCGACAAGGAGCCGGTGCACCGGGTGGTGAGCCTGCTGTTAGAAGCCGAAGCTGCGGTTGAGGAAAGCTCCGATGCTGCTGGTAGTGGTTCAGTCATTCGCGTCGTTGATGCATTCTTAGTCCCTAAATTTCGATACGACTCTATCAAAAAGCAGTTCTACGAGTACACAGGCAGCTTACCTATTCATGGGGAAGCATCAGCAAAAGCGGCTCTGTACAGGGATAGGTTTCTCTTGCTGTTCCAGAGGCTCTCTCGTGACCAGCATTTTTCAAAGCCGGCTTTTGATTCTGAGTTTTCACATTTTGGAAGCTGTGAGATATCTCCAATTCAATCTCTGGTTGGGCAAACTGGCAGAAGATGGGTCATGGGAGTGATATCACAGCTGGAAGATGGGCATTTTTATTTGGAAGACCTGACTGCTTCAGTTGAAATCAATTTATCTACTGCTATATCCTTTTCTTCTTTGACAATAATAATGCGTTTTGGTGCACAAAGATCATACTTCTTTACCTATCCCAACATGCATGAGTCTAAATCAACTCAAGCATGGGAAGACATATTGAGAATCCAAAGTATGAGTATAGTTCGTTTCTTGTTAGTTGTCAGTTTGTTGCTATGTGATTGGATTGGAGGACTTTGGTGCAAGTTCTTTGACAAGCAATACAAGATAACTACAGGATTCTTTTCAGAGAATACCATAGTTGTGGCAGAAGGTGAGATGCTAGTGGAGGGTATTTTTCAGGTCTTAACATGTGGATTCCCCCCATTGGAGGATAGAGATAAGTCACTTAGATTAATTGCAGGGCATGACTTTTTTGGAGGTGGTACTTTTACTAAAGAGGAAACTATCAGACTGGCAGAGATGGAAAAGAGAGCAGTCAATGACATGTTTGTTGTACTGTCCGATATTTGGCTGGACAGTGAAGAGAAGGCTATGGGAAAGCTAGAGACTGTACTGGATGGTTTTGAGGGTGTGGAAGTGGTTCCTTCATTATTTGTTTTCATGGGAAACTTCTGTTCTCACCCATGTAACCTTTCTTTTCATTTTTACTCAAGCCTTCGGTTGCAGTTTGGCAAGCTAGGGCAAATGATTGCTGCCCATCCACGGCTAAAAGAGCAAAGTAAATTCTTGTTTATTCCAGGTCCTGATGATCCAGGTCCTTCCACAGTTCTACCTAGGTGTGCTCTGCCAAAATATTTAACTGAGGAGCTCCAAAAGCATATTCCCAATGCCATATTTTCAAGCAATCCTTGCAGGATCAAATATTACACTCAAGAGATTGTATTTTTCCGCCAGGATTTGCTGTATCGAATGCGCCGTTCATGTTTAATGCCACCTTCTATGGAAGAAACTGATGATCCTTTTCAGCATCTTGTTGCTACAATAACCCATCAGAGTCATCTCTGTCCATTGCCTCTAACAGTACAACCCGTCATCTGGAATTATGATCACTCCCTTTATCTCTATCCTACTCCACATACGATAGTATTAGGAGACAGAAGTGAGCAAAAGGCATTCAAGTACACGGGAATCACATGTTTTAACACTGGTTCCTTCTCAATTGACAGCACCTTTGTGGCATACCGACCTTGCTCTCAGGAAGTTGAATTGTCAGCCCTTTTCAAGCTAGTACAAGCTGCTCAGGCACGATATGACAGCGACTTTTCAAGCAAGACTCGAGAGAGAAACGGCCCAATTGGAATCTCCATCTCAAGTGGATCATTCTTGTTGTCTGATCTTAAAGACTCTCGAGATGATGTGAAGTCCTTCAATAAATGCAAAAGGGGTAAGTTTGGAGGTGAAGATCAAGCGAATGTTGATGATAAGTTTTCTCAGATGTCTTCTTGGTCTCTCCCATTGACTGGTCGGATTAAAGTAAATGTGGATGGGGCTTTTGTTATGGAGAATAGTAAGGCTAACATTGGAGTTATTTTCAGAGATGATAGGGGGAGCTTCATTAAAGGCTTTGGAGACCCTCTGAAGGCAAATTCCCTTCATATAGGGGAAGCTTTGACACTAAGGAAAGCTGTTTATGAGTGGAATTTTGATGCTATTATGATTGATATTCGCAAAGGCTTTTCTAAAGTCCCTAAGGCAAAGTTGTCACTGGTGGCTTGCCAGGGGAATGTTGTAGTTGATTGGATTGTGGGTGCTGTTTTGAAATGGATGTGCCCTTCAGGGTTGGTTTTGATACCACCGTTCTAG 2391 0.4279 MNASTTRKKIQRKCKIRGYTLKVDALDEILSFVSRFDAPDEDEAIDLLLDQLEHESLKSTIIDKEPVHRVVSLLLEAEAAVEESSDAAGSGSVIRVVDAFLVPKFRYDSIKKQFYEYTGSLPIHGEASAKAALYRDRFLLLFQRLSRDQHFSKPAFDSEFSHFGSCEISPIQSLVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSTAISFSSLTIIMRFGAQRSYFFTYPNMHESKSTQAWEDILRIQSMSIVRFLLVVSLLLCDWIGGLWCKFFDKQYKITTGFFSENTIVVAEGEMLVEGIFQVLTCGFPPLEDRDKSLRLIAGHDFFGGGTFTKEETIRLAEMEKRAVNDMFVVLSDIWLDSEEKAMGKLETVLDGFEGVEVVPSLFVFMGNFCSHPCNLSFHFYSSLRLQFGKLGQMIAAHPRLKEQSKFLFIPGPDDPGPSTVLPRCALPKYLTEELQKHIPNAIFSSNPCRIKYYTQEIVFFRQDLLYRMRRSCLMPPSMEETDDPFQHLVATITHQSHLCPLPLTVQPVIWNYDHSLYLYPTPHTIVLGDRSEQKAFKYTGITCFNTGSFSIDSTFVAYRPCSQEVELSALFKLVQAAQARYDSDFSSKTRERNGPIGISISSGSFLLSDLKDSRDDVKSFNKCKRGKFGGEDQANVDDKFSQMSSWSLPLTGRIKVNVDGAFVMENSKANIGVIFRDDRGSFIKGFGDPLKANSLHIGEALTLRKAVYEWNFDAIMIDIRKGFSKVPKAKLSLVACQGNVVVDWIVGAVLKWMCPSGLVLIPPF 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1662 796 PANTHER DNA POLYMERASE EPSILON SUBUNIT B 281 602 IPR016266 GO:0003677|GO:0006261|GO:0008622
Dere06g1662 796 Gene3D - 1 72 - -
Dere06g1662 796 Pfam DNA polymerase alpha/epsilon subunit B 359 565 IPR007185 GO:0003677|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1662 Dere-ChrDere06 31092926 31104958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1662 284 559 Core DNA Replication Machinery Family AT5G22110 78.986 3.09e-161 475