Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1659 ATGGAGTATGGTTGTGGAAGCGGTGGGTCCCCTGGGGATTATCATCATCACCATGATGCTTCTCCTGATTCCCAGAGGAGGCAGAAACGCTACCATCGTCACACTGCTAATCAGATTCAGAGACTCGAATCGATGTTCAAGGAGTGTCCACATCCGGATGAGAAGCAGAGGTTACAGTTAAGCAGAGAGCTAGGCTTGGCTCCTAGACAGATCAAGTTTTGGTTTCAAAATAGAAGGACACAGATGAAGGCCCAGCACGAAAGAGCTGATAACTTGGCATTACGAGAAGAGAATGACAAGATACGATGTGAGAACATAGCCATAAGAGAGGCTCTAAAAAATGTTATATGCCCCTCTTGTGGTGGCCCTCCTCTCAGTGAGGATTCCTATTTTGATGAGCAAAATTTGCGTTTGGAGAATGTCCAGCTGAAAGAAGAGCTGGATAGGGTATCTAGCATTACATCTAAATACATAGGAAGACCAATTTCTCAGCTCCCACCAGTTCAGCCCTTCCGTATATCTTCTCTGGACTTAACAATGGGAAGTTATGGGACCCAAGGGCTTGGTGTTCCTTCCCTTGATCTTGATCTTCTCACAGGAAGTTCTTCATATATGCAAAATTTACCTTATCAACCTGCTAGTCTTTCAGATATGGACAAGTCTTTAATGTCTGACATTGCTGCAAATGCCATGGAAGAACTACTCGGGCTTCTGCAGACTAATGAACCATTGTGGATGAAGTCGTCAAGCACAGAGGGGAGAGACGTTCTTAACCATGAAACCTATGAAAGAATGTTCCCAAAAGTAAATAATCACTTGAAGAACCCTAACTTAAGGATTGAAGCATCTAGAGATTCAGGAGTTGTTATCATGAATGGTTTAACTTTGGTTGGCATGTTTATGGACCCAAAGAAGTGGATGGAACTGTTTCCCACAATCGTCTCAATGGCAAGGACAATTGAAGTTATATCTTCCGGGATGTTGGGTGGTCATAGTGGTTCTTTGCAATTGATGTATGGAGAATTGCATGTGCTTTCTCCACTAGTTCCAACTAGAGAGTTCTACTTCCTGCGTTACTGTCAGCAAATTGAGCAAGGCTTATGGGCAATAGTAGATGTTTCCTATGACTTTCCCCATGATAGCCAATTCGCTCCTCAATTTCGGTCTCATAGGCTTCCATCTGGCTGCATGATCCAGGACATGCCCAATGGGTATTCTAAGGTTACATGGGTTGAACACCTAGAAATTGAAGAAAAAACTCCAACTCATAGGCTATACAGAAATCTTATCCATAATGGGAAGGCGTTTGGAGCAGAAAGATGGCTTACTACTCTCGGGAGGATGTGTGAAAGATTTGCTTGTCTCATGGTGACAGGCAACTCAACCCGGGATCTAGGAGGAGTGATTCCATCGCCAGAAGGCAAGAGAAGCATGATGAAACTTGCGCAAAGGATGGTCACAAGTTTCTGTGCATGCATTAGCTCATCAACTGGTCAGAAATGGACAACACTTTCTGGGTTGAATGAGGCTGAAGTCAGAGTCACTGTTCATAAGAGCACTGATCCTGGCCAGCCTAGTGGGGTAGTGTTAAGTGCAGCCACCACCATTTGGCTCTCCATTCCTCCACAGACAGTGTTCAATTTCTTTAAGGATGAAGCAAAAAGACCTCAGTGGGATGTTCTTTCCAACGGAAATGCTGTGCAAGAAGTAGCTCATATAGCTAATGGATCCCACCCTGGAAACTCCATATCTGTTCTTCGTGCTTTCAACACTAACCAGAATAACATGCTTATACTGCAAGAAACCTGCATAGACTCCTCTGGTTCACTTGTGGTCTATTGCCCAGTTGAACTTCCAGCCATTAACGTAGCTATGAGTGGAGAAGACCCTTCATACATCCCTCTTCTACCTTCTGGTTTTACCATTTCACCTGATGGACAGTCTGAACAAGAAGCATCAACTAGCTCAAACTCACAGAGAAACAACCATACAGAGAGGTCTGGGGGTTCACTAGTGACAGTCGCTTTTCAGATTCTGGTTAGCAGCTTACCATCAGCAAAGTTAAACTTGGAGTCTGTGACTACTGTTAATAACCTTATCAGCACCACTGTGCAGCAAATAAAAGCAGCCTTGAATTGTCCTAGTTCCTGA 2151 0.4403 MEYGCGSGGSPGDYHHHHDASPDSQRRQKRYHRHTANQIQRLESMFKECPHPDEKQRLQLSRELGLAPRQIKFWFQNRRTQMKAQHERADNLALREENDKIRCENIAIREALKNVICPSCGGPPLSEDSYFDEQNLRLENVQLKEELDRVSSITSKYIGRPISQLPPVQPFRISSLDLTMGSYGTQGLGVPSLDLDLLTGSSSYMQNLPYQPASLSDMDKSLMSDIAANAMEELLGLLQTNEPLWMKSSSTEGRDVLNHETYERMFPKVNNHLKNPNLRIEASRDSGVVIMNGLTLVGMFMDPKKWMELFPTIVSMARTIEVISSGMLGGHSGSLQLMYGELHVLSPLVPTREFYFLRYCQQIEQGLWAIVDVSYDFPHDSQFAPQFRSHRLPSGCMIQDMPNGYSKVTWVEHLEIEEKTPTHRLYRNLIHNGKAFGAERWLTTLGRMCERFACLMVTGNSTRDLGGVIPSPEGKRSMMKLAQRMVTSFCACISSSTGQKWTTLSGLNEAEVRVTVHKSTDPGQPSGVVLSAATTIWLSIPPQTVFNFFKDEAKRPQWDVLSNGNAVQEVAHIANGSHPGNSISVLRAFNTNQNNMLILQETCIDSSGSLVVYCPVELPAINVAMSGEDPSYIPLLPSGFTISPDGQSEQEASTSSNSQRNNHTERSGGSLVTVAFQILVSSLPSAKLNLESVTTVNNLISTTVQQIKAALNCPSS 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1659 716 SUPERFAMILY Bet v1-like 472 708 - -
Dere06g1659 716 FunFam Homeobox-leucine zipper protein HDG1 14 101 - -
Dere06g1659 716 Coils Coil 133 153 - -
Dere06g1659 716 SUPERFAMILY Bet v1-like 217 452 - -
Dere06g1659 716 Gene3D - 223 436 IPR023393 -
Dere06g1659 716 Pfam Homeodomain 29 83 IPR001356 GO:0003677
Dere06g1659 716 FunFam Homeobox-leucine zipper protein GLABRA 2 225 450 - -
Dere06g1659 716 MobiDBLite consensus disorder prediction 1 34 - -
Dere06g1659 716 Pfam START domain 226 451 IPR002913 GO:0008289
Dere06g1659 716 ProSitePatterns 'Homeobox' domain signature. 60 83 IPR017970 GO:0000981|GO:0006355
Dere06g1659 716 SMART HOX_1 26 89 IPR001356 GO:0003677
Dere06g1659 716 ProSiteProfiles 'Homeobox' domain profile. 25 85 IPR001356 GO:0003677
Dere06g1659 716 ProSiteProfiles START domain profile. 216 454 IPR002913 GO:0008289
Dere06g1659 716 MobiDBLite consensus disorder prediction 643 667 - -
Dere06g1659 716 CDD homeodomain 27 86 IPR001356 GO:0003677
Dere06g1659 716 SMART START_1 225 451 IPR002913 GO:0008289
Dere06g1659 716 Gene3D - 13 100 - -
Dere06g1659 716 CDD START_ArGLABRA2_like 220 450 - -
Dere06g1659 716 MobiDBLite consensus disorder prediction 12 26 - -
Dere06g1659 716 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 26 712 IPR042160 -
Dere06g1659 716 SUPERFAMILY Homeodomain-like 10 85 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1659 Dere-ChrDere06 31065162 31068430 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1659 23 716 Homeobox Transcription Factor Family AT1G73360 65.297 0.0 908
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere06g1659 START 1.8e-47 CL0209