Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1657 ATGGGGCCTGTGGGATTACCTCCTGGTTTTAGGTTTCATCCAACAGATGAAGAGCTTGTGAATTACTACCTAAAGAGGAAGATCAATGGTCAAGAGATTGAACTTGATATCATTCCTGAAGTCGATCTCTACAAATGTGAACCTTGGGAATTAGCAGAGAAATCGTTTTTGCCCAGTAGAGACCCAGAGTGGTACTTCTTTGGACCGAGGGACAGGAAGTACCCGAATGGGTTCAGAACGAATAGGGCAACACGAGCAGGGTACTGGAAGTCCACAGGGAAAGACAGAAGAGTGGTGAGCCAGAGCAGAGCCATAGGGATGAAGAAGACTTTGGTTTACTACAGAGGAAGAGCTCCTCAAGGCATCAGAACTGACTGGGTCATGCATGAGTATCGCCTTGATGACAAAGACTGGGACGACCCCTCCGGAATACTGGATGCTTATGCGTTGTGCCGTGTGTTCAAGAAAAATGGAATATGCTCTGATGTTGAAGAGCAGGCAGGGCAATACAGTAGTTTGACACTAATAGAGAGCTCCCAAACCTTAATTAATGAATGTGAAACAATGTCCCCCGAAGTAGCAGCAGGAGCATCATCTTCATGCTTGGAAGACGAAGCCAAAGATGATTCATGGATGCAATTCATCACAGACGATGCTTGGTATTCTTCAAGTAATAATGCAACTGTGGCTGGTGGTGAAGAACTCTCTCATATTACTTTTACAAACTAA 729 0.4499 MGPVGLPPGFRFHPTDEELVNYYLKRKINGQEIELDIIPEVDLYKCEPWELAEKSFLPSRDPEWYFFGPRDRKYPNGFRTNRATRAGYWKSTGKDRRVVSQSRAIGMKKTLVYYRGRAPQGIRTDWVMHEYRLDDKDWDDPSGILDAYALCRVFKKNGICSDVEEQAGQYSSLTLIESSQTLINECETMSPEVAAGASSSCLEDEAKDDSWMQFITDDAWYSSSNNATVAGGEELSHITFTN 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1657 242 Gene3D NAC domain 15 159 IPR036093 GO:0003677|GO:0006355
Dere06g1657 242 Pfam No apical meristem (NAM) protein 7 133 IPR003441 GO:0003677|GO:0006355
Dere06g1657 242 SUPERFAMILY NAC domain 3 157 IPR036093 GO:0003677|GO:0006355
Dere06g1657 242 FunFam Nac domain-containing protein 86 15 159 - -
Dere06g1657 242 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 196 - -
Dere06g1657 242 ProSiteProfiles NAC domain profile. 6 156 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1657 Dere-ChrDere06 31048226 31051512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1657 1 233 NAC Transcription Factor Family AT3G17730 77.143 1.78e-134 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere06g1657 NAM 4.1e-40 No_clan