Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1641 ATGAGAGAGAAGGCGAATTTCGAGCTAGGGCACACAACGCTTGTTCTGTCTCGCGCCGCTTCGTCTCTCCCTTTCTGCGCTCGACGGTTATTGGATTCTAATTGTTCGAAAATGGCTGACACTCATGATACTGATAAGAACATTGAGGTGTGGAAGATCAAGAAATTGATCAAAGCTCTGGAGGCTGCTCGAGGAAATGGGACAAGTATGATTTCCCTCATCATGCCTCCACGCGATCAAATATCTCGTGTTACCAAGATGCTTGGTGATGAATTTGGAACTGCTTCAAACATAAAAAGCAGAGTGAATCGGCAGTCTGTGCTGGGTGCAATCACTTCTGCTCAGCAGAGGCTTAAGCTTTATAACAAGGTTCCTCCAAACGGGCTTGTTCTTTATACTGGGACAATTGTAACCGAAGATGGAAAGGAAAAGAAGGTGACTATTGATTTTGAGCCTTTCAGACCTATTAATGCATCTCTCTACCTTTGTGACAACAAGTTTCACACAGAAGCTCTAAATGAGCTCCTAGAGTCTGATGACAAGTTTGGTTTTATAGTAATGGATGGGAATGGTACTCTTTTTGGGACCTTGAGTGGTAATACAAGAGAGGTGCTTCATAAATTTAGTGTGGATCTCCCAAAGAAGCACGGAAGAGGAGGGCAGTCAGCCCTACGATTTGCTCGTCTTCGAATGGAGAAGCGTCATAACTATGTGAGGAAGACTGCAGAGCTTGCTACACAGTTTTATATCAATCCTGCTACCAGTCAGCCCAATGTTTCAGGATTAATTTTGGCTGGTTCAGCTGATTTCAAAACTGAGCTTAGTCAGTCAGATATGTTTGATCCTCGACTTCAGGCAAAAATACTTAATGTTGTTGATGTATCTTATGGAGGGGAGAATGGCTTCAATCAGGCTATTGAACTTTCAGCAGAGATTCTGTCCAACGTGAAGTTCATCCAGGAGAAACGCTTGATTGGAAAGTACTTTGAGGAGATTAGTCAGGATACTGGGAAGTATGTTTTTGGAGTTGATGATACTCTAAAAGCTCTGGAAATGGGTGCCGTTGAGACACTTATTGTCTGGGAAAATCTGGATATGAATAGGTATGTCTTGAAACACGGCACTACCAGTGAGATTGTTATAAAACACTTCAACAAGGAACAGGAGTCAATTCAGGAGAATTTCCGGGATTCCGCTAACAATGCTGAATATGAGGTTCAGGAAAAGATGTCTCTCTTGGAGTGGTTTGCAAATGAGTACAGGCGGTTTGGTTGCACTCTTGAGTTTGTCACTAATAAATCACAAGAGGGTTCACAGTTTTGCAGGGGTTTTGGTGGCATAGGGGGGATTCTGCGTTACCAGCTTGATATGAGATCATTTGATGATTTCTCTGATGACGGAGAAGTGTATGATGATTCTGAATAG 1425 0.4274 MREKANFELGHTTLVLSRAASSLPFCARRLLDSNCSKMADTHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQISRVTKMLGDEFGTASNIKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTEDGKEKKVTIDFEPFRPINASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHGRGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVSGLILAGSADFKTELSQSDMFDPRLQAKILNVVDVSYGGENGFNQAIELSAEILSNVKFIQEKRLIGKYFEEISQDTGKYVFGVDDTLKALEMGAVETLIVWENLDMNRYVLKHGTTSEIVIKHFNKEQESIQENFRDSANNAEYEVQEKMSLLEWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDMRSFDDFSDDGEVYDDSE 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1641 474 SUPERFAMILY L30e-like 315 457 IPR029064 -
Dere06g1641 474 SUPERFAMILY N-terminal domain of eukaryotic peptide chain release factor subunit 1, ERF1 43 177 IPR024049 -
Dere06g1641 474 Gene3D - 316 474 IPR029064 -
Dere06g1641 474 SMART eRF1_1_2 41 177 IPR005140 -
Dere06g1641 474 Gene3D eRF1 domain 2 173 314 IPR042226 -
Dere06g1641 474 FunFam Peptide chain release factor subunit 1 316 474 - -
Dere06g1641 474 FunFam Eukaryotic peptide chain release factor subunit 1 173 314 - -
Dere06g1641 474 Pfam eRF1 domain 1 55 175 IPR005140 -
Dere06g1641 474 FunFam Eukaryotic peptide chain release factor subunit 1 39 172 - -
Dere06g1641 474 PANTHER PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1 40 466 IPR004403 GO:0003747|GO:0006415
Dere06g1641 474 Pfam eRF1 domain 3 318 455 IPR005142 -
Dere06g1641 474 Pfam eRF1 domain 2 181 314 IPR005141 -
Dere06g1641 474 NCBIfam peptide chain release factor aRF-1 50 454 IPR004403 GO:0003747|GO:0006415
Dere06g1641 474 SUPERFAMILY Translational machinery components 179 313 - -
Dere06g1641 474 Gene3D eRF1 domain 1 34 172 IPR024049 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1641 Dere-ChrDere06 30918683 30921468 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1641 38 474 Eukaryotic Initiation Factors Gene Family AT3G26618 89.703 0.0 816