Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1585 ATGGAGATAGAGGCGAGCAAGGCGGCCGGGAATAATGGCTCCGGGTTGCCAGCGCTGAGTCCTCTGAGCGAGACGCTGTGGAGGGAGAAGGCGAACGTGGAGTTCATGGGAGATGTGTCGGCGAGGCTGACGTGGAAGGATCTGACGGTGATGGTGACCCTGGGCAACGGAGAGACCCAGAACGTTCTAGAAGGTCTTACCGGCTACGCCGAGCCGGGGACCTTCACGGCCCTCATGGGTCCCTCCGGCTCCGGCAAGTCCACTCTGCTCGACGCTCTCTCTAGCCGTCTCGCCGCCAATGCCTTCCTCTCCGGCACCATCCTCCTCAATGGTCGCAAAGCCAAGCTCTCTTTCGGCACCGCCGCGTATGTGACGCAAGACGACAATCTGATTGGGACGTTGACGGTACGAGAGACGATATCGTACTCTGCTCGGCTGAGGCTGCCGGACAAGATGGCGTGGTCGGACAAGAGAGCTCTGGTGGAGAGTACGATAGTGGCGATGGGGCTGCAGGACTGTGCGGACACGGTGATCGGAAACTGGCATCTCCGGGGGATCAGTGGAGGAGAGAAGAGACGAGTTAGCATTGCTTTGGAGATATTGATGAGGCCTCGCTTGCTTTTTCTCGACGAGCCTACCAGTGGTCTCGACAGTGCTTCAGCTTTCTTTGTGACTCAAACACTACGTGCCCTAGCAAGGGATGGTCGAACTGTGATAGCTTCTATTCACCAACCTAGCAGTGAAGTATTTGAACTATTTGACCAACTGTACCTTCTTTCTGGGGGCAAAACTGTCTATTTTGGCCAAGCTTCTGAAGCATACGAGTTCTTTGCCCAAGCTGGCTTCCCATGCCCTGCTCTGAGGAACCCTTCAGATCACTTCCTTAGATGCATCAACTCTGACTTTGATAAAGTTAAGGCCACCCTTAAAGGCTCCATGAAACTCAGGTTTGAAGGAAGCGATGATCCTCTGGACAAGATAACTACAGCTGAGGCTATCAGGACTCTCATAGACTACTACCGCACTTCTCAGTACTCTTATGCTGCAATACAAAAAGTGGATGAGATATCCAAAGTTAAAGGAACAGTGCTAGACGCAGGAGGAAGCCAGGCCAGTATCTTCATGCAGGCTTTTACATTAACCAAGAGATCATTCATCAACATGTCAAGGGATTTTGGATACTACTGGCTTAGGCTCGTCATCTACATTGTTGTCACTATCTGCATTGGAACCATCTACTTGAACGTTGGAACTGGCTACAATTCTATTCTGGCAAGAGGTTCATGTGCATCTTTCGTCTTCGGCTTTGTCACATTCATGTCAATCGGTGGGTTCCCTTCGTTTGTTGAAGACATGAAGGTTTTCCAAAGGGAAAGGCTGAATGGGCACTACGGTGTGATATCCTTTGTTATTAGCAACACTTTATCTGCAATGCCGTTTCTGATACTGATAACTTTTCTATCTGGAACAATATGTTACTTCATGGTCCGCCTCCACCCTGGCTTCTGGCATTATCTCTTCTTTGTGCTGTGCCTTTATGCAAGTGTCACTGTGGTTGAAAGCTTAATGATGGCCATTGCTAGTATTGTTCCCAACTTCCTCATGGGTATCATCATAGGAGCTGGAATTCAGGGCATATTCATGCTGGTCTCTGGCTACTTCAGGCTCCCACATGATATTCCAAAGCCATTCTGGCGTTACCCAATGTCATATATCAGTTTCCACTTCTGGGCATTACAGGGCCAGTACCAGAATGATCTGAAAGGCTTGATCTTTGACAACCAGACACCAGATCTTCCCAAGATTCCCGGCGAATACATCCTCGAAAACGTGTTCCAGATCGATGTAAACCGATCGAAGTGGATTGATTTATCTGTAATATTCAGCATGATCATCATCTACCGCATCATCTTCTTTATCATGATCAAGATCAACGAGGATGTTACTCCATGGGTTAGGGGTTACATAGCTAGGAGAAGAATGCAGCAGAAGAGTGGAACACAGAACACCACCATTGCTCCTGATGTTCTTACTCAGTCTCCATCTCTTAGAACCTTTATTACCAGCCAAAGTGGAGGTGTTAGGAAAAGGTAA 2094 0.4881 MEIEASKAAGNNGSGLPALSPLSETLWREKANVEFMGDVSARLTWKDLTVMVTLGNGETQNVLEGLTGYAEPGTFTALMGPSGSGKSTLLDALSSRLAANAFLSGTILLNGRKAKLSFGTAAYVTQDDNLIGTLTVRETISYSARLRLPDKMAWSDKRALVESTIVAMGLQDCADTVIGNWHLRGISGGEKRRVSIALEILMRPRLLFLDEPTSGLDSASAFFVTQTLRALARDGRTVIASIHQPSSEVFELFDQLYLLSGGKTVYFGQASEAYEFFAQAGFPCPALRNPSDHFLRCINSDFDKVKATLKGSMKLRFEGSDDPLDKITTAEAIRTLIDYYRTSQYSYAAIQKVDEISKVKGTVLDAGGSQASIFMQAFTLTKRSFINMSRDFGYYWLRLVIYIVVTICIGTIYLNVGTGYNSILARGSCASFVFGFVTFMSIGGFPSFVEDMKVFQRERLNGHYGVISFVISNTLSAMPFLILITFLSGTICYFMVRLHPGFWHYLFFVLCLYASVTVVESLMMAIASIVPNFLMGIIIGAGIQGIFMLVSGYFRLPHDIPKPFWRYPMSYISFHFWALQGQYQNDLKGLIFDNQTPDLPKIPGEYILENVFQIDVNRSKWIDLSVIFSMIIIYRIIFFIMIKINEDVTPWVRGYIARRRMQQKSGTQNTTIAPDVLTQSPSLRTFITSQSGGVRKR 697
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1585 697 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 43 280 IPR027417 -
Dere06g1585 697 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 43 286 IPR003439 GO:0005524
Dere06g1585 697 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 31 664 - -
Dere06g1585 697 FunFam ABC transporter G family member 11 37 280 - -
Dere06g1585 697 Pfam ABC-2 type transporter 376 582 IPR013525 GO:0016020|GO:0140359
Dere06g1585 697 ProSitePatterns ABC transporters family signature. 186 200 IPR017871 GO:0005524|GO:0016887
Dere06g1585 697 SMART AAA_5 72 243 IPR003593 GO:0016887
Dere06g1585 697 Pfam ABC-2 type transporter 243 299 IPR043926 GO:0140359
Dere06g1585 697 Gene3D - 36 281 IPR027417 -
Dere06g1585 697 CDD ABCG_EPDR 40 268 - -
Dere06g1585 697 Pfam ABC transporter 65 214 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1585 Dere-ChrDere06 30067322 30073249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1585 73 274 Calmodulin-binding Proteins AT2G36910 31.925 1.37e-11 66.2