Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1578 ATGGCACATGAAGAGCCTTCATCTTCTTCGTTCAACCATGGTTGGGACTACGATGTTTTCGTGAGCTTCACTGGAGGAGACACTCGTTACAGTTTTACAGGAAACCTTTGCTATGCTTTGAACCAGAAGGGGATCCACACCTTCAGAGATGACGTCAAGCTTAGGAAAGGAGAAAGCATTCCACCATCTCTTCTCAAAGCGATCGAAGTGTCCAGAATTTCCGTCATCGTTTTCTCCGAAAATTATGCATCCTCGAGCTGGTGTCTTGATGAGCTGGTCAAGATCATTGAGTGTATGAAGGAGAAGGAACAGCTGGTTCTTCCAGTGTTCTACTATGTTGATCCTTCAGATGTGAGGCATCAGAGAGGAAGCTATGGAAGGTCAATGGCTGAACATGAAGCCAAGCTCAAGAATCGGAATAAGGAAACAGTGCAGGAATGGAGGCATGCACAAAAAAGATTGCATAGTTGGAGGGTTGCACTAAGAGAGGCTGCAAATTTGTCTGGATGGCATTTCAAAAATGGGTATGAGGTTGAGTTAATTCAAGAGATAACAGAAAAAATCTCTAACATTTTAAATCGCACATTTTTACACGATGCTGATTATCCAGTGGGACTGAAGTATCGAACACAGCAAGTGATGTCACTTTTAAGTATGAAGTCTAAAAAGGATGCATTGATGGTGGGAATTCATGGCATTGGTGGAATTGGTAAAACAACCATTGCAAGAGCTGTGTATAACTCAATAGCAAAACAGTTTGATGCCTCTTGTTTTCTTGCTGATGTAAGAGAACGCTCAAGGAAGAATGGTCTCGTACAAGTTCAAGAGACACTTTTTCTGGATTTGCTTGGAGAAAATAACATGAAGTTGGGTAATGTAAGCCAAGGAATTCCTATACTAGAAAACAGACTTCGACGCAAGAAGGTTCTTCTGATTCTTGACGATGTTGATCATCTAAAACAAAAGTTTGAGCATTTGACTCTAATAAACTTCAGTGAATGTGATACTATAACAAGAATACCTGATATCTCTACAGTTCCAAATCTAACAAGACTTATGGCTAACAATTGTACCGACTTAGTCAAAATTCATGAATCGGTTGGATATCTTGGCAAGCTTGTCACATTGAGCACTGAAAATTGCCCTAAGCTTGAGAGTTTTCCACCAAGCATGAGGTCTACGTCTCTTGAATATCTAAATCTTGGCAAGTGCTCTAGCATTCACAATTTCCCAAATATTCTGTCAAAAATGGAAAATATGAAAAGGATTGACATACAAGGGACTGCCATAAAAAACTTTCCCAGTTCAACTACAAAAATTGATGGTCTTGAAGAGCTTGTATTGGCATCTTGTATTGAGGACCTGCCTGTTAACACTGACATGTTTCAAAACACTGAAGAGCTTAATGTAGAAGGATGTCCACAACTTCCAAAGCTTCTAGGGAAGACATTAATGGTGGATCGAACAAACTGGACACCAAAGTTGAATAGACTGGTCTTGAAAAACTGTGATCTATGTGGTGAAGATCTTGAGTTGATTCTCAGTTGCTTTTTGAAGTTGAAGTGGTTGGTCCTATCAAACAACAACTTCGTGAACATCCTTGATTGCATTGAAGACCTTGCAGACCTGCTTTTCCTTCATGTGGATAATTGCAAGCTGCTTAGACATATTTCTATGCTTCCACCATGCTTGCAATACATAGATGCAAGGAACTGCATATCATTAACTCCGGATTCATCAGATGTAATACTGAGTCAGGCATTTCTTGAGGTGGAGTACATAGATATTGTGGTGTTGAGGAAGAAAATTCCGAATTGGTTCGATCTTTGTAGCAAAGGAGGATCTGTGGCCTTCTGGGTTCGTCGAAAATTCCCAGGCATTGCTGCATTCTTGGTTCTAGGGGGTAAAACTGAAGCAGGCATCAATTTTACATGTGAATTCACCCTGCTCATCAACGGCGTCCAAGTGGTTGAAGGTGAAAGATCGTTGCCAGTTGATCATGTATGGCTGTTTGACCTGCGAATTCTCTTAACAGGAAAAAAGTGGCACAACCTTAACGAGCATCTTCATGGAGGTTGGAACCACGTGGAGATTTCATGTTCTATTAAGAACAATCAGCCACACAATGCGACAGTTAAATCCTGTGGGATTCATCTCTATAAGGATAGAACGAACATCCACGATGTCTCCTTCATAAGCCCTGATCTTCATGGTTCAGATATTGCCTATAATGACATGGAAAATAACGATTCGGATATCTATGATGAAGAAAGCAAAGATGTTGTTTTTCGTCAAGTATTAGCTGAATTTTTTGACAAGAAGATTATAAATCTGACGGACGGTCTTCGATCTAGCAGAAGAAGAGACCATGATGACGAGGATGAGGAAGAGGAGGAGGAACAACCTTTGACTGATAATGATAATGAAATCCAAGAAAGAAGTGAAGTTGTGGTCAAGGACAATGGAAAAGGTATAGCATACAGTGACAACCCTGAGGAGGATGAGAGTGGGGATTGTCTCATTGACAGTGAGACTTGGGATTTGATGATGTTGGAGAGTATGAGAGGAGAAACCACTGAGAAAGGTGCCCAATTGAGTAAATTATTTATGGGTTCATCAACAGAACCAGCACCACAACCAGAATCCCTAGTTAGAACCATCCATTACAAAGAACCAATGCTTCAAGCAACAGGGAAATTGAAGGAGAATCTTGTGCAGGGGTCAACATCTTCTGCTTATACAACTGAAAACAGGGGAATTCCAGTAAATAATTCTTCCAACATTAAGATACCCGAAATGGTTGGCTTGAAAAATAGCAAATGGAACTTAAAAGCCCAAGCTGAATCAAACGCAGAAGCAGCGAAATCTCTCATCCAGATTGCAGAACATAGAGCTAATCAACAATTAAAGGCAGAAGAAATTGAGGGTACCCAGATTTCCATGGAAGCATTTTACGCTTCTCTTGAAGCAGAGAATGCAACTCTTTCAAATCTTCAAGACACCCAAATCACCACAAGGCCAAGCGAAGAAACCCAGAAAGCATTTCAAATTCTTCGAGACTTTGTCTCAAAAAAGTTCTCTCTTTTGTTACAGCCTGAACAATCCAAGTTGATGAAGAACATTCTCGAGTACCTCTTAAGTTTGACCCCAGAAGAAGGAATTTCATTGAGGATGAGATCAGGGATATATCAAATTTCTAGAAGTTTTACTCAGTGGGATCTGCAATATAATGATGCAATTTATAAACTTGAATCTGCTAGCTCTGAAATATCAAAAGTTGAAGAACTGAAAGAGAGGCTCGATGCCAATGTGAGAGAGTTCCGAGAAATGGAGGAACTTGAGAGTGGCATATGGAGCCAGTTGGATTATTTGGAGGAAAGGAAGAGAGAGCTAGAAGAGGAAATGAATAAGGTAAAAGGTGAGATCGCAGATTATAGAGCAGCAAGAGAGGATGTTGCAGAGAGAAAGAGAGAAGTGTTTGAGAACGGAAGAATGCTTAAAGCTCAGAGGGATGATTTGAGGAACAGAGTGCCACGCTTGAGAGCAGAAAGGGAAGGGGCTAAGATAAGCCAAGCTTATATAGACGACGAGTGGTCAAAACTTGGACGACAATTTATTCAAAGCTCAAGTCTTGAAGATTGGAGCTAG 3648 0.4054 MAHEEPSSSSFNHGWDYDVFVSFTGGDTRYSFTGNLCYALNQKGIHTFRDDVKLRKGESIPPSLLKAIEVSRISVIVFSENYASSSWCLDELVKIIECMKEKEQLVLPVFYYVDPSDVRHQRGSYGRSMAEHEAKLKNRNKETVQEWRHAQKRLHSWRVALREAANLSGWHFKNGYEVELIQEITEKISNILNRTFLHDADYPVGLKYRTQQVMSLLSMKSKKDALMVGIHGIGGIGKTTIARAVYNSIAKQFDASCFLADVRERSRKNGLVQVQETLFLDLLGENNMKLGNVSQGIPILENRLRRKKVLLILDDVDHLKQKFEHLTLINFSECDTITRIPDISTVPNLTRLMANNCTDLVKIHESVGYLGKLVTLSTENCPKLESFPPSMRSTSLEYLNLGKCSSIHNFPNILSKMENMKRIDIQGTAIKNFPSSTTKIDGLEELVLASCIEDLPVNTDMFQNTEELNVEGCPQLPKLLGKTLMVDRTNWTPKLNRLVLKNCDLCGEDLELILSCFLKLKWLVLSNNNFVNILDCIEDLADLLFLHVDNCKLLRHISMLPPCLQYIDARNCISLTPDSSDVILSQAFLEVEYIDIVVLRKKIPNWFDLCSKGGSVAFWVRRKFPGIAAFLVLGGKTEAGINFTCEFTLLINGVQVVEGERSLPVDHVWLFDLRILLTGKKWHNLNEHLHGGWNHVEISCSIKNNQPHNATVKSCGIHLYKDRTNIHDVSFISPDLHGSDIAYNDMENNDSDIYDEESKDVVFRQVLAEFFDKKIINLTDGLRSSRRRDHDDEDEEEEEEQPLTDNDNEIQERSEVVVKDNGKGIAYSDNPEEDESGDCLIDSETWDLMMLESMRGETTEKGAQLSKLFMGSSTEPAPQPESLVRTIHYKEPMLQATGKLKENLVQGSTSSAYTTENRGIPVNNSSNIKIPEMVGLKNSKWNLKAQAESNAEAAKSLIQIAEHRANQQLKAEEIEGTQISMEAFYASLEAENATLSNLQDTQITTRPSEETQKAFQILRDFVSKKFSLLLQPEQSKLMKNILEYLLSLTPEEGISLRMRSGIYQISRSFTQWDLQYNDAIYKLESASSEISKVEELKERLDANVREFREMEELESGIWSQLDYLEERKRELEEEMNKVKGEIADYRAAREDVAERKREVFENGRMLKAQRDDLRNRVPRLRAEREGAKISQAYIDDEWSKLGRQFIQSSSLEDWS 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1578 1215 Coils Coil 1083 1113 - -
Dere06g1578 1215 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 325 500 IPR044974 GO:0006952
Dere06g1578 1215 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 194 - -
Dere06g1578 1215 Gene3D Ribonuclease Inhibitor 489 582 IPR032675 -
Dere06g1578 1215 Gene3D - 194 341 IPR027417 -
Dere06g1578 1215 Gene3D Ribonuclease Inhibitor 353 487 IPR032675 -
Dere06g1578 1215 SMART till_3 16 167 IPR000157 GO:0007165
Dere06g1578 1215 Pfam NB-ARC domain 208 318 IPR002182 GO:0043531
Dere06g1578 1215 Coils Coil 1121 1155 - -
Dere06g1578 1215 Pfam TIR domain 17 195 IPR000157 GO:0007165
Dere06g1578 1215 Coils Coil 944 964 - -
Dere06g1578 1215 MobiDBLite consensus disorder prediction 782 815 - -
Dere06g1578 1215 PRINTS Disease resistance protein signature 470 484 - -
Dere06g1578 1215 PRINTS Disease resistance protein signature 303 317 - -
Dere06g1578 1215 PRINTS Disease resistance protein signature 227 242 - -
Dere06g1578 1215 Gene3D - 13 193 IPR035897 -
Dere06g1578 1215 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 331 IPR027417 -
Dere06g1578 1215 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 170 IPR035897 -
Dere06g1578 1215 SUPERFAMILY L domain-like 318 578 - -
Dere06g1578 1215 ProSiteProfiles TIR domain profile. 15 192 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1578 Dere-ChrDere06 29765074 29772532 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1578 323 479 WRKY Transcription Factor Family AT4G12020 35.220 2.11e-14 76.6