Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1574 ATGGCACGGTCTCAATCTGAATATAAGTTTATAAGTGAGATCATTAAAGAGGTATCCGAAAAGATCAATCGCATCCCTTTACATGTAGCTAATCACCCAGTTGGACTAGAATCTTCTGTGCAAGAAGTAACCGCTCTATTGAGACTTGGGTCCGATGAGGGAGTTGACATGGTAGGGATTTATGGAATTGGTGGAATAGGTAAAACAACCATTGCACGTGCTGTTTATAACTTAATTGGTGATCAATTTGAAGGTTTATGCTTCCTTGCTGATATTAGAGAAAAGGCAACTAATAAGCTTGGACTTGTGCAACTCCAAGAGACACTACTTTCTGAAGTAGTTGCAGAAAATGATATCAAACTTGGAGATGTTAATAGAGGAATTCCAGTCATAAAAAGAAGGCTCTGCCGAAAGAAGGTTCTCTTGATTCTTGATGATGTTGATAAACTGAAACAGTTACAAGCAATTGCTGGAGGACATAATTGGTTTGGTTCTGGAAGCAGGACCATTATCACAACAAGAAACAAACATTTGCTAACTACTCATGGGGTGGTAAAATTGTACGAGGTGAAGGAGCTAAATGTCAGTAAATCTCTTGAATTGTTTAGTTGGAATGCCTTTAAGAATAGCAAAATTGATTCAAGTTATGTGGGTATTTCAAGCCGTGTGGTCAAGTATGCTGGTGGCCTTCCATTGGCTTTGGAAGTAATAGGCTCTAACTTGTTTGGTAAAACATTGGAAAAATGGAATTCTCTGCTAGATAAGTATGAAAGAATTCCTAATAGAGAGGTCCATGAAATACTTAAAGTAAGCTACGACAGTTTAGAAGAAGATGAGAAGGAATTTTTCCTTGACATTGCTTGTTTCTTCAATAAATTCAACGTAAGATATGTCAAAGAAATACTCTATGCTCGTGGTTTGCACGCAGAAATTGGTATTCAAGTCTTGATGGACAAGTGTCTCATCAAGATTGATGGTTCAAACTGTGTGAGAATCCATGACTTGATTCAAGACATGGGCAGAGAAACTGTTAGACAAGAATCAACGTTTGAGCCTGGAGAACGCAGCAGGTTGTGGTTTGATGATGACATTGTTCATATTTTGGAAGATGATACGGGAACTGATAAAATTGAAGTGATTATGCTGTACTTATGCAAAGATAAAGAAGTACAGTGGAATGGAGAAGCCTTCAAGAAGATGAAAAACCTGAGAATTCTCATTATTGGAAATGCACGCTTTTCCCAAGGCCCCACTTATCTCCCAAATAGTTTAAGAGTGCTGGATTGGAGTGGATATACATCACAATCTTTACCATCTAATTTTAACCCTAAGAAACTTATGTTTCATTCTTTATGTTTTATGGATTTTGAAGGTTGTAAATTCTTGACACAAGTGCCTAACCTCTCTGGACTCCCAAACTTGGGGGCATTGTGTCTTGATAACTGCACGAATTTAATCAGAGTTCATGATTCAGTTGGCTTTCTTGATAAACTCAGATTGTTGAGTGTCCAAGGATGCACCCAGCTTGAAATGTTGGCACCTTGCATCAGATTGACTTCTCTTGAGACTCTTGATCTCAGGGGGTGCTCAAGCCTTGGGCTTTTCCCAGAAGTACTAGGATTTATGGAAGATATAAGAGACGTTTATTTGGATGAGACTGCAATAAAAGAATTGCCATTTACAATTGGAAATCTTAGTGGGTTGAAACGACTATACCTGAGGCATTGTGCAAGGCTTAAACAGCTACCAAGCAGCATATTAGTATTACCCAAACTTGAGGTAATACTGACTCATGGGAGTAGAGGCTTTCAATTATTTAGTGTTAGAGGGTATGAAATTCAAGAAAAGATGAGCTCAGGAATGTCTTTAGGCATGTTTTTTCTTTATTCCCTGAAAAAAGCTGTGGGTGGAGGCCTACCTTGTTACCTTGATTCTTATTGTATAGACACAAATCCAAATAATTTCATCCAAGTATTTGGTCTTTGGAATCCTTTGATTCCAGTTAAACAGCCGCTTAACGACTGGCTGTTAACCTGGAATCGTAGAACAAAATTAAGAGTCATTCATGGCAGCAGGGAATCATCAGTGTCTTTCTGGTTTTATGAGAAATTCCCTAAGATAGCTGTATGTGTGATCGGGGAACCTGGCACGGAAGTAGACAATTCAATCTTGGATATTAAGCTCAGTGTGCATGTCAATGGTGCAGAATTACTTACTTGTTTGTGTAATTATATATCTCTTACAGGAGATTTAATGAAACATATACTTTGGTGTGGCCTACAGTGCAAACATGGGAGAGTGATTTCAGCGCAAGAACGGAACCATGTTTCAGTGCAAGAACGGAACCATGTCAAGGTTTCATGGGAATTGAAATATCACAGGTCTTGTAGGGTAATTTCCAACCACAATGTTAACCCAACAGGGATGATAAAATGGACTGGAATTTATGTCTGTGAGGAAGAAAACAGCAAAATAGAAAATATCCGGTTCACAAATCCTAATATCTCTCTGTCTCAGCCTCCAACAATGAACAGGGAGGATGGACAAATCTATTATTATCAAATGGCTTTGTCGACTCTTGAAAATATTGTACTCAGTTAG 2601 0.3837 MARSQSEYKFISEIIKEVSEKINRIPLHVANHPVGLESSVQEVTALLRLGSDEGVDMVGIYGIGGIGKTTIARAVYNLIGDQFEGLCFLADIREKATNKLGLVQLQETLLSEVVAENDIKLGDVNRGIPVIKRRLCRKKVLLILDDVDKLKQLQAIAGGHNWFGSGSRTIITTRNKHLLTTHGVVKLYEVKELNVSKSLELFSWNAFKNSKIDSSYVGISSRVVKYAGGLPLALEVIGSNLFGKTLEKWNSLLDKYERIPNREVHEILKVSYDSLEEDEKEFFLDIACFFNKFNVRYVKEILYARGLHAEIGIQVLMDKCLIKIDGSNCVRIHDLIQDMGRETVRQESTFEPGERSRLWFDDDIVHILEDDTGTDKIEVIMLYLCKDKEVQWNGEAFKKMKNLRILIIGNARFSQGPTYLPNSLRVLDWSGYTSQSLPSNFNPKKLMFHSLCFMDFEGCKFLTQVPNLSGLPNLGALCLDNCTNLIRVHDSVGFLDKLRLLSVQGCTQLEMLAPCIRLTSLETLDLRGCSSLGLFPEVLGFMEDIRDVYLDETAIKELPFTIGNLSGLKRLYLRHCARLKQLPSSILVLPKLEVILTHGSRGFQLFSVRGYEIQEKMSSGMSLGMFFLYSLKKAVGGGLPCYLDSYCIDTNPNNFIQVFGLWNPLIPVKQPLNDWLLTWNRRTKLRVIHGSRESSVSFWFYEKFPKIAVCVIGEPGTEVDNSILDIKLSVHVNGAELLTCLCNYISLTGDLMKHILWCGLQCKHGRVISAQERNHVSVQERNHVKVSWELKYHRSCRVISNHNVNPTGMIKWTGIYVCEEENSKIENIRFTNPNISLSQPPTMNREDGQIYYYQMALSTLENIVLS 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1574 866 Gene3D Ribonuclease Inhibitor 376 622 IPR032675 -
Dere06g1574 866 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 595 IPR044974 GO:0006952
Dere06g1574 866 Pfam NB-ARC domain 38 275 IPR002182 GO:0043531
Dere06g1574 866 Gene3D - 14 186 IPR027417 -
Dere06g1574 866 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 286 IPR027417 -
Dere06g1574 866 SUPERFAMILY L domain-like 378 600 - -
Dere06g1574 866 Gene3D - 192 276 IPR042197 -
Dere06g1574 866 PRINTS Disease resistance protein signature 516 532 - -
Dere06g1574 866 PRINTS Disease resistance protein signature 134 148 - -
Dere06g1574 866 PRINTS Disease resistance protein signature 227 241 - -
Dere06g1574 866 PRINTS Disease resistance protein signature 57 72 - -
Dere06g1574 866 SUPERFAMILY "Winged helix" DNA-binding domain 263 368 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1574 Dere-ChrDere06 29649811 29653442 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1574 5 606 WRKY Transcription Factor Family AT4G12020 34.006 2.11e-87 303