Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1573 ATGGCACATGAAGAGCCTTCATCTTCTTCGTTCAACCATGGTTGGGACTACGATGTTTTCGTGAGCTTCACTGGAGGAGACACTCGTTACAGTTTTACAGGAAACCTTTGCTATGCTTTGAACCAGAAGGGGATCCACACCTTCAGAGATGACGTCAAACTTAGGAAAGGAGAAAGTATTTCACCATCTCTTCTCAAAGCGATCGAAGTGTCCAGAATTTCCGTCATCGTTTTCTCCGAAAATTATGCATCCTCGAGCTGGTGTCTTGATGAGCTGGTCAAGATCATTGAGTGTATGAAGGACAAGGGACAGCTGGTTCTTCCAGTGTTCTACTATGTTGATCCTTCAGATGTGAGGCATCAGAGAGGAAGCTATGGAAGGTCAATGGCTGAACATGAAGCCAAGCTCAAGAATCGGAATAAGGAAACAGTGCTGGAATGGAGGCTTGCACAAAAAAGATTGCATAGTTGGAGGGTTGCACTAAGAGAGGCTGCAAAGTTGTCTGGATGGCATTTCAAAAATGGGTATGAAGTTGAGTTAATTCAAGAGATAACAGAAAAAATCTCCAACATTTTAAATCGTACATTTTTACACATTGCTGATTATCCAGTGGGACTGAAGTATCGAATACTGCAAGTGATGTCACTTTTAAGTATGAAGTCTAAAAAGGATGCATTGATGGTGGGAATTCATGGAATTGGTGGAATTGGTAAAACAACCATCGCAAGAGCTGTGTATAACTCAATAGCAAAACAGTTTGATGCCTCTTGTTTTCTTGCTGATGTAAGAGAAAGCTCAAGGAAGAATGGTCTTGTACAAGTTCAAGAGACACTTTTTCTGGATTTGCTTGGAGAAAATAACATGAAGTTGGGTAATGTAAGTCAAGGAATTCCTATACTAGAAAACAGACTTCGACGCAAGAAGGTTCTTCTGATTCTTGACGATGTTGATCATCTAAAACAAAAGTTTGAGCATTTGACTTTAATAAACTTCAGTGATTGTGATACTATAACAAGAATACCTGATATCTCTACAGTTCCAAATCTAACAAGACTTCTGGCTAACAATTGCCCCGATTTAGCCGAAATTCATGAATCGGTTGGAAATCTTGGCAAGCTTGTCACATTGAGCACTGAAAATTGCCCTAAACTTGAGAGTTTTCCACCAAGCATGAGGTCTGCGTCTCTTGAATCTCTAAATCTTGCCAAGTGCTCTAGCATTCACAGTTTCCCAAATATTCTGTCAAAAATGCAAAATATGAAAAGGATTGACATACAAGGGACTGCCATAAAAAACTTTCCCAGTTCAATTACAAAAATTGATGGTCTTGAAGAGCTTGTATTGGCATCTTGTATTGAGGACCTGCCTATTAACACTGACATGTTTCAAAACACTGAAGAGCTTAATGTGGAAGGATGCCCACAACTTCCAAAGCTTCTAGGGAAGATATTAATGGTGGATCCAACAAACTGGACACCAAAGTTGAATAGACTGGTCTTGAAAAACTGTGATCTATGTGGTGAAGATCTTGAGTTGATTCTCAGTTGCTTTTTGAAGTTGAAGTGGTTGGTCCTATCAAACAACAACTTCGTAACCATCCCTAATTGCATTGAAGACCTTGCAGACCTGGTTTTCCTTCATGTGGATAATTGCAAGCTGCTTAGACACATTTCTGTGCTTCCACCATACTTGCAATACATAGATGCAAGTAACTGCATATCATTAACTCCGGATTCATCAGATGTAATACTGAGTCAGGCATTTCTTGAGGTGGAGTACATAGATATTGTGGTGTTGAGGAAGAAAATTCCGAATTGGTTCGATCATTGTAGCAAAGGAGGATCTGTGGCCTTCTGGGTTCGTCGGAAATTCCCAGGAATTGCTGCATTCTTGGTTCTAGGGGGTAAAACTGAAGCAGGCATCAATTTTACAAGTGAATTCAGCCTGCTTATCAATGGCGTCCAAGTGGTCGAAGGTGAAAGATCGTTGCCAATTGATCATGTATGGCTGTTTGACCTACGAATTCTCTTAACAGCAAAAGAGTGGCACAACCTTAACGAGGATCTTCATGGAGGTTGGAACCACGTGGAGATTTCATGGTTTATTAAGAACAATCAGCCACACAATGCGACTGTTAAATCCTGTGGGATTCATCTCTATAAGGATAGAACGAACATCCACGATGTCTCCTTCATAAGCCCTGATCTTCATGGTTCAGATATTGCCTATAATGACATGGAAAATAACGATTCGGATATCTATGATGAAGAAAGCAAAGATGTTGTTTTTCGTCAAGTATTAGCTGAATTTTTTGACAAGAAGATTATAAATCTGACGGACGGTCTTCGATCTAGCAGAAGAAGAGACCATGATGACGAGGATGAGGAAGAGGAGGAGGAACAACCTTTGACTGACAATGATAATGAAATCCCAGAAAGAAGTGAAGTTGTGGTCAAGGACAATGGAAAAGGTATAGCATACAGTGACAACCCTGAGGAGGATGAGAGTGGGGATTGTCTCATTGACAGTGAGACTTGGGATTTGATGATGTTGGAGAGTATGAAAGGAGAAACCACTGAGAAAGGTGCCCAATTGAGTAAATTATTTATGGGTTCATCAACAGAACCAGCACCACAACCAGAATCCCTAGTTAGAACCATCCATTACAAAGAACCAATGCTTGAAGCAACAGGGAAATTGAAGGAGAATGCCAAACTTGTGCAGGGGTCTACATCCTCTGCTTATACAACTCAAAACAGGGGAATTCCAGTAACTAATTCTTCCAACATTAAGATCCCCGAAATGGTTGGCTTGAGAAATTGCAAATGGAACTTAAAAGCCCAAGCTGAATCAAACGCAGAAGCAGTGAAATCTCTCATCCAGATTGCAGAACATAGAGCTAATCAACAATTAGAGGCAGAAGAAATTGAGGATACCCAGATTTCCATGGAAGCATTTTACGCTTCTCTTGAAGCAGAGAATGCAACTCTTTCAAATCTTCAAGGCACCCAAATCACCACAAGGCCAAGCGAAGAAACCCAGAAAGCATTGCAAATTCTTCGAGACTGTCTCAAAAAAGTTCTCTCTTTTGTTACAGCCTAA 3102 0.4052 MAHEEPSSSSFNHGWDYDVFVSFTGGDTRYSFTGNLCYALNQKGIHTFRDDVKLRKGESISPSLLKAIEVSRISVIVFSENYASSSWCLDELVKIIECMKDKGQLVLPVFYYVDPSDVRHQRGSYGRSMAEHEAKLKNRNKETVLEWRLAQKRLHSWRVALREAAKLSGWHFKNGYEVELIQEITEKISNILNRTFLHIADYPVGLKYRILQVMSLLSMKSKKDALMVGIHGIGGIGKTTIARAVYNSIAKQFDASCFLADVRESSRKNGLVQVQETLFLDLLGENNMKLGNVSQGIPILENRLRRKKVLLILDDVDHLKQKFEHLTLINFSDCDTITRIPDISTVPNLTRLLANNCPDLAEIHESVGNLGKLVTLSTENCPKLESFPPSMRSASLESLNLAKCSSIHSFPNILSKMQNMKRIDIQGTAIKNFPSSITKIDGLEELVLASCIEDLPINTDMFQNTEELNVEGCPQLPKLLGKILMVDPTNWTPKLNRLVLKNCDLCGEDLELILSCFLKLKWLVLSNNNFVTIPNCIEDLADLVFLHVDNCKLLRHISVLPPYLQYIDASNCISLTPDSSDVILSQAFLEVEYIDIVVLRKKIPNWFDHCSKGGSVAFWVRRKFPGIAAFLVLGGKTEAGINFTSEFSLLINGVQVVEGERSLPIDHVWLFDLRILLTAKEWHNLNEDLHGGWNHVEISWFIKNNQPHNATVKSCGIHLYKDRTNIHDVSFISPDLHGSDIAYNDMENNDSDIYDEESKDVVFRQVLAEFFDKKIINLTDGLRSSRRRDHDDEDEEEEEEQPLTDNDNEIPERSEVVVKDNGKGIAYSDNPEEDESGDCLIDSETWDLMMLESMKGETTEKGAQLSKLFMGSSTEPAPQPESLVRTIHYKEPMLEATGKLKENAKLVQGSTSSAYTTQNRGIPVTNSSNIKIPEMVGLRNCKWNLKAQAESNAEAVKSLIQIAEHRANQQLEAEEIEDTQISMEAFYASLEAENATLSNLQGTQITTRPSEETQKALQILRDCLKKVLSFVTA 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1573 1033 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 325 497 IPR044974 GO:0006952
Dere06g1573 1033 SMART till_3 16 167 IPR000157 GO:0007165
Dere06g1573 1033 SUPERFAMILY L domain-like 316 604 - -
Dere06g1573 1033 PRINTS Disease resistance protein signature 227 242 - -
Dere06g1573 1033 PRINTS Disease resistance protein signature 303 317 - -
Dere06g1573 1033 PRINTS Disease resistance protein signature 470 484 - -
Dere06g1573 1033 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 189 376 IPR027417 -
Dere06g1573 1033 Coils Coil 946 966 - -
Dere06g1573 1033 Pfam NB-ARC domain 209 318 IPR002182 GO:0043531
Dere06g1573 1033 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 170 IPR035897 -
Dere06g1573 1033 Gene3D - 11 196 IPR035897 -
Dere06g1573 1033 FunFam Disease resistance protein (TIR-NBS-LRR class) 13 194 - -
Dere06g1573 1033 Gene3D Ribonuclease Inhibitor 353 485 IPR032675 -
Dere06g1573 1033 ProSiteProfiles TIR domain profile. 15 192 IPR000157 GO:0007165
Dere06g1573 1033 MobiDBLite consensus disorder prediction 782 814 - -
Dere06g1573 1033 Gene3D - 197 340 IPR027417 -
Dere06g1573 1033 Gene3D Ribonuclease Inhibitor 486 613 IPR032675 -
Dere06g1573 1033 Pfam TIR domain 17 194 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1573 Dere-ChrDere06 29638261 29645149 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1573 323 479 WRKY Transcription Factor Family AT4G12020 34.591 2.57e-14 76.3