Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1492 ATGGCGTTTTCACCACTTCGCTTCTCTCTCCTAGTTTTTTTCCTGTTGAACCTAAAATGTGTATGTGGAAATGCAGAGCTAAGAGCCCTGATGGACATGAAGGCCACTTTGGACCCAGAAAGCCGTTATCTGTCCTCGTGGACTATCAATGGAAACCCATGTGATGGTTCGTTCGAAGGAGTGGCTTGCAACGAGAAGGGTCAAGTGGCTAACATTTCGTTGCAGGGAAAAGGTCTCTCTGGGAAGCTCTCGCCTGCCATTGCAGGGCTCAAGCACCTCACAGGACTTTACTTGCATTACAACTCCTTGTACGGAACTATACCCAGAGAAATTGCGAACTTGACTAACCTAAGTGACTTGTATTTGAATGTGAATCATCTGTCTGGGGAAATCCCTTCTGAGCTAGGCAGAATGGAGAACTTGCAAGTTTTGCAGCTTTGCTATAATCAGTTGACAGGAAGCATACCTACACGGCTTGGTGCATTGAAGAAGCTTGTAGTTCTTGCTCTGCAGTCAAATCAATTAACTGGTGCTATCCCTGCTAGTTTAGGTGATTTGGAAATGCTAATGAGGCTAGATTTGAGCTGTAATCGCCTCTTTGGTTCCATTCCCTCTAGATTAGCCGATGCTCCTTCGCTGCAAGTTCTAGATGTTCGCAACAACACGCTCTCTGGGAGTGTACCTCCTGCTCTGAAGAGACTAGACGATGGATTTTCGTATGAGTACAATTTGGGATTATGTGGAGCTCAATTTTCATCCTTGAAAACCTGCAATGGTTCGGATCATATCAATCCAGGGAGACCTGACAAGCCTTATGGAGCAGGTTTAAATGGTACATCAACACAAGATATACCAGAAACTGCAAATGTACAGTTGCCTTGCAATGGAACTCTGTGCCAAAATTTATCAAAATCCAAACAATCAGCATCCATTATTGTTGGCATAGTTGTGTTTGCAATTGCAGTGCCAGCAATTGGTGTTCTAACTTTCACACAATATCGAAGGCGAAAACAGAAGCTCGAAAACTCCTTTCATATCTCAGATAATCGTCTAAACACTGACCAAGCCAAAGGTACATACCGGAAAAATGGATCTCCTTTGGTCAGCCTTGAATACTCTAGTGGCTGGGACCCATTGGCTGATAGCCGGAATTTCAACTGGGATAGCCACGACATGTTCCATAGTTTCAGGTTCAACTTGGAAGAGGTTGAGACGGCTACTCAGTATTTCTCAGAGTTGAACTTGTTGGGTAAGAGTAACTTCAGTGCAACCTATAAAGGAATGTTAAGAGATGGATCTGTTGTTGCCATTAAAAGCATTAGTAAAACAAGTTGCAAGAGTGATGAATCTGAGTTTTTGAAAGGACTAAACATTTTGACCTCGCTGAGGAATGAGAATTTAGTTAGGTTGAGAGGATTTTGTTGCTCAAGGGGACGTGGCGAGTGCTTTCTGATCTATGATTTTGTTCCTAATGGAAATCTTTTGCGCTACCTTGATGTGAAGGAAGGCGAAGGAGAAGTCCTTGAATGGTCAACTAGAGTTTCTATTGTGAAAGGCATTGCTAAAGGAATAGCATATTTACATGCATACAACACCAACAAGCCTGCCCTTGTTCACCAAAACATCTCAGCTGAGAAAGTACTCGTTGATCAGCGATTCAACCCAGTGCTTTCAGATTCTGGCCTCTACAAGCTTCTTACCAATGACATCGTCTTCTCAGCACTTAAGGCTAGTGCAGCAAGGGGCTATCTAGCTCCTGAATACACCACCACTGGGCGGTTCACAGAGAAAAGTGATGTGTTTGCTTTCGGGGTGCTTCTTTTCCAGATCCTCTCAGGCAAAAGAAAGATCACTAGCTCAATGCGCCTTGCTGCAGAATCTTCCAGATTCCAAGAACTCATTGACCCAAATCTCCAAGGCAGATTCTTTGAATACGAGGCAGCTAAGCTAGCAAAAATGGCCTTACTTTGCTCTCATGAGTCTCCTTTTGAGAGGCCATCAATGGAGGTCGTTGTTCTAGAACTGGGAAATTTCAGTAGTTGTCTCTGA 2049 0.4373 MAFSPLRFSLLVFFLLNLKCVCGNAELRALMDMKATLDPESRYLSSWTINGNPCDGSFEGVACNEKGQVANISLQGKGLSGKLSPAIAGLKHLTGLYLHYNSLYGTIPREIANLTNLSDLYLNVNHLSGEIPSELGRMENLQVLQLCYNQLTGSIPTRLGALKKLVVLALQSNQLTGAIPASLGDLEMLMRLDLSCNRLFGSIPSRLADAPSLQVLDVRNNTLSGSVPPALKRLDDGFSYEYNLGLCGAQFSSLKTCNGSDHINPGRPDKPYGAGLNGTSTQDIPETANVQLPCNGTLCQNLSKSKQSASIIVGIVVFAIAVPAIGVLTFTQYRRRKQKLENSFHISDNRLNTDQAKGTYRKNGSPLVSLEYSSGWDPLADSRNFNWDSHDMFHSFRFNLEEVETATQYFSELNLLGKSNFSATYKGMLRDGSVVAIKSISKTSCKSDESEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLIYDFVPNGNLLRYLDVKEGEGEVLEWSTRVSIVKGIAKGIAYLHAYNTNKPALVHQNISAEKVLVDQRFNPVLSDSGLYKLLTNDIVFSALKASAARGYLAPEYTTTGRFTEKSDVFAFGVLLFQILSGKRKITSSMRLAAESSRFQELIDPNLQGRFFEYEAAKLAKMALLCSHESPFERPSMEVVVLELGNFSSCL 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1492 682 SUPERFAMILY L domain-like 20 233 - -
Dere06g1492 682 FunFam Protein NSP-INTERACTING KINASE 2 136 258 - -
Dere06g1492 682 Gene3D Ribonuclease Inhibitor 140 257 IPR032675 -
Dere06g1492 682 Pfam Leucine rich repeat 164 223 IPR001611 GO:0005515
Dere06g1492 682 Pfam Protein tyrosine and serine/threonine kinase 414 674 IPR001245 GO:0004672|GO:0006468
Dere06g1492 682 FunFam Protein NSP-INTERACTING KINASE 2 489 679 - -
Dere06g1492 682 Gene3D Transferase(Phosphotransferase) domain 1 489 681 - -
Dere06g1492 682 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 71 675 - -
Dere06g1492 682 Gene3D Phosphorylase Kinase; domain 1 381 488 - -
Dere06g1492 682 ProSiteProfiles Protein kinase domain profile. 410 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1492 682 FunFam Protein NSP-INTERACTING KINASE 2 381 488 - -
Dere06g1492 682 SUPERFAMILY Protein kinase-like (PK-like) 384 674 IPR011009 -
Dere06g1492 682 Gene3D Ribonuclease Inhibitor 25 139 IPR032675 -
Dere06g1492 682 FunFam Leucine-rich repeat receptor-like kinase 25 134 - -
Dere06g1492 682 Pfam Leucine rich repeat N-terminal domain 24 64 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1492 Dere-ChrDere06 27977698 27980651 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1492 10 523 Miscellaneous Gene Families AT4G22730 55.682 0.0 569
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Dere06g1492 PK_Tyr_Ser-Thr 1.9e-36 CL0016