Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1486 ATGGGATTCTGGGGGATCGAAGTGAAACCCGGCAAACCATATCCTTATCATGCGGATAATGTGCAAGGGAAGCTTCATGTAACTCAGGCAACCTTAGGCATTGGCTCATCAACAGAGAAAAGCATTCTTCAGTGCTCTGCTGGGCACAAAAATCCAGTTTTCTTGTGTTCATTGCTGCCAAATAAAATTGAGTCATGCCCTTTGGATCTTGAGTTCGACGAAGATGATTTAGTGGCCTTCTCAGTGATTGGTCTGCGGAGTATCCATCTCTCTGGTTATTTTGTGGCTACTGATGGGGAAGACCTTAGGGATGACTATGAATATGATTCTTTCGGGGAGGATATTATGGAGACAGAGACAGAGGAGTCTTCTGAATATGACACTGAAGATGAATATGCTGATGGTTTCATTGACGATAGTGATATTGACACTTATCCACCTTCACCTGTCCCAAATAGTGGAGTTGTAATTGAGGAAATAACTGATGATGATCAACCTAAAAGTGGAGATGGTCCTTCTAAGCAGTCTAAGAAAAAGGACCAAATGGCTAACACTAGGGATAACTCAAATTCTCTGCAACAAATTGTTGTTAGAGGTGATGAGGGCATCACTGTTCTGGAAAGTGAAGATGAAGATGGTTTTCCAATTTCTGCTTCATATAAGGGCAAATCTGATTCTCTGAAGGCAGAAGTAGAAGTGAAAGAAGAACCAACACATAAGAGGACTGAGAAAGCCAATAAAAAGAAATTGAAAGCTGATGATCATGCTGTAACCTTAAAACGAAAAGTTGAAGGTGCTGACGAAGATGAGCATCCAGAAGGGAAGAAGAAGAAGAAGAAGAATAAGTTGAAAGAACAAGGCAAAGGAGAAATTGCTCAAGTATCTGGTAATATTAATGAGACTAATGATGCTAGAGAAGATGAAAAGCAGCCTGAGGAGGTGAAAACAACACCCAGCCTGAACCATGTTTCCCATGCGGAGGATGAGCATGAAGGAAATCTATCCAATCAAAAGGTCCTTGACGAGAAGAAAAACAAGAAAAAGAAGAAGAAAAAGACTAAGGATGAAGGGGTAACTAATGCAAATCAAACTTCAGATAGAGGAGAGAAGGAAATGGAAGCCACACCATCCCAAATGAGAACCTTCCCAAATGGGTTGGTTATTGAGGAACTCTCCATGGGTAAACCAGATGGCAAAAAAGCTACTCCTGGAAAACAGGTCAGTGTTAAATACATTGGCAAGCTAAAGAAAAATGGGAAAATATTTGACTCGAATGTTGGAAGAGCACCCTTTAAATTTCGCCTTGGTATAGGACAAGTCATAAAGGGTTGGGACGTTGGGGTCAATGGTATGAGGATTGGTGACAAAAGAAGAATCACAATTCCACCATCTATGGGTTATGGCGATAAACGTGCTGGGAGTATACCTCCAAATTCGTGGCTTGTATTTGATGTTGAGTTGGTCGATGTTCGCTGA 1476 0.4119 MGFWGIEVKPGKPYPYHADNVQGKLHVTQATLGIGSSTEKSILQCSAGHKNPVFLCSLLPNKIESCPLDLEFDEDDLVAFSVIGLRSIHLSGYFVATDGEDLRDDYEYDSFGEDIMETETEESSEYDTEDEYADGFIDDSDIDTYPPSPVPNSGVVIEEITDDDQPKSGDGPSKQSKKKDQMANTRDNSNSLQQIVVRGDEGITVLESEDEDGFPISASYKGKSDSLKAEVEVKEEPTHKRTEKANKKKLKADDHAVTLKRKVEGADEDEHPEGKKKKKKNKLKEQGKGEIAQVSGNINETNDAREDEKQPEEVKTTPSLNHVSHAEDEHEGNLSNQKVLDEKKNKKKKKKKTKDEGVTNANQTSDRGEKEMEATPSQMRTFPNGLVIEELSMGKPDGKKATPGKQVSVKYIGKLKKNGKIFDSNVGRAPFKFRLGIGQVIKGWDVGVNGMRIGDKRRITIPPSMGYGDKRAGSIPPNSWLVFDVELVDVR 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1486 491 Pfam Nucleoplasmin-like domain 3 95 IPR041232 -
Dere06g1486 491 MobiDBLite consensus disorder prediction 135 376 - -
Dere06g1486 491 FunFam Peptidyl-prolyl cis-trans isomerase 379 491 - -
Dere06g1486 491 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 404 491 IPR001179 GO:0003755
Dere06g1486 491 MobiDBLite consensus disorder prediction 322 342 - -
Dere06g1486 491 SUPERFAMILY FKBP-like 346 490 - -
Dere06g1486 491 MobiDBLite consensus disorder prediction 225 276 - -
Dere06g1486 491 Gene3D - 335 491 IPR046357 GO:0003755
Dere06g1486 491 PIRSF FK506-bp_FPR3 262 491 IPR023566 GO:0003755
Dere06g1486 491 PIRSF FK506-bp_FPR3 1 54 IPR023566 GO:0003755
Dere06g1486 491 PIRSF FK506-bp_FPR3 49 265 IPR023566 GO:0003755
Dere06g1486 491 PIRSF FK506-bp_FPR3 148 319 IPR023566 GO:0003755
Dere06g1486 491 MobiDBLite consensus disorder prediction 301 315 - -
Dere06g1486 491 Coils Coil 336 356 - -
Dere06g1486 491 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 399 488 IPR001179 GO:0003755
Dere06g1486 491 Gene3D Nucleoplasmin core domain 1 100 - -
Dere06g1486 491 PANTHER FKBP-TYPE PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKPA 41 490 - -
Dere06g1486 491 MobiDBLite consensus disorder prediction 160 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1486 Dere-ChrDere06 27894639 27899929 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1486 389 491 Calmodulin-binding Proteins AT5G48570 44.828 2.08e-17 83.2