Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1469 ATGGAAGATGGGTTTATGCTATTCAATATGTGGAAGCAGGAAAGGAAGCATCTTTTTGTAGTAATGGCGGTTTTCTTGCTTCTCTCTCCATTTGCCTCGTCCATAAGTGAAGAAGGACAAGCCTTAATGGGGATGAAGTCTTCCTTCGGCAACGTAGCAGATGTCTTGCTTGACTGGGATGACCTGCACAACGATGACTTCTGTTCTTGGCGTGGAGTCTACTGTGATAATTTAACCCTTACTGTGCTTACTCTGAATCTGTCAAGTTTGAACTTGGGTGGGGAGATATCACCGGCCATTGGCGATTTAAGAAACCTGCAATCCATTGATCTGCAGGGAAATAAACTAACAGGTCAAATCCCTGATGAAATTGGGAACTGTGCTGCACTTGTTCATCTGGATTTGTCTGATAATGAGCTATATGGTGACATACCCTTTTCCATATCAAAGTTAAAGCAGCTTGAGTTTCTGAATTTAAAGAATAATCAGTTGACGGGTCCTATTCCTTCGACCTTAACCCAAATCCCAAACCTGAAGACTGTTGATCTTGCTCGAAATCGTTTCACTGGTGAGATACCAAGACTTCTCTATTGGAATGAAGTGTTGCAATACCTAGGATTGCGAGGGAATATGTTGAGTGGAACTCTGTCCCCAGATATATGTCAATTAACTGGTCTGTGTGATGTGAGAGGCAACAATTTGACGGGAACTATACCTGAAAGCATTGGGAACTGTACAAGTTTTCAAATTTTGGATATATCATATAACCAGATTACTGGACAGATTCCCTACAATATTGGATTCCTGCAAGTGGCAACTTTGTCTCTTCAAGGGAATAGACTAACTGGGAAAATTCCTGAAGTGATTGGTTTAATGCAAGCCCTTGCTATTTTAGATTTGAGTGAGAATGGACTGGTGGGACCCATCCCTCCAGTACTTGGCAATTTGTCCTTCACAGGCAAGCTTTATCTCCATGGAAACATGCTCACTGGTCCAATACCTCCTGAACTTGGCAATATGTCGAAACTGAGCTACCTGCAATTGAATGACAATAAACTCGTTGGCAGAATTCCTGAAGAACTTGGAAAGCTTGAACATTTGTTTGAATTGAATCTTGCTAACAATTATCTTGAAGGATCTATTCCACATAACATAAGCTCCTGCACTGCTTTGAATAAGTTTAATGTGCATGGTAATCGCTTAAGTGGTTCTGTTCCTTTGAGCTTCCGGAGCCTTGGGAGTTTGACTTACTTAAATCTCTCTGAAAACAACTTCAAAGGGAGTATACCCTTCGAGTTGGGCCATATCATAAATCTTGATACACTGGATCTATCTCGCAATAACTTTTCAGGACAGGTACCTTCATCTGTTGGTGATTTAGAACATCTTCTGACACTTAACTTGAGCCATAACCATTTCAATGGTACCTTACCTGCTGAATTTGGTAATCTGAGAAGCGTACAGATCATTGATATGTCATTCAACAATCTGTCAGGTAGCATCCCTCCCGAAATTGGTCAACTGCAGAACCTTGTTACACTGATTCTGAATGACAATGGCTTGCATGGGAAAATTCCAGATCAGTTAACAAACTGCTTCAGTCTTTCTGCCCTGAATGTCTCGTACAATAACTTATCTGGAACAATTCCTCCTATGAAGAACTTCTCACGATTTTTGTATGACAGCTTCATTGGAAATCCTTTATTATGTGGAAATTGGTTAGGATCAAGATGTGGTTCTTACATATCAAAATCCAGAGTAACTTTTTCCAGGGCTGCAATTGTTTGTCTCACGGTTGGTATCCTCGCATTATTGGCCATGGTAATAGTTGCTATGTTCAGATTGAGCCAATCAATGGAATTGATTAAAGGATCCAGCGGAACTGGGGAAGGTTCCCCTAAACTAGTCATTCTTCATATGGATATGGCCATCCACACCTTTGATGATATAATGAGAAGTACAGAGAATCTAAGTGAGAAATATATCATAGGGTATGGTGCCTCTAGTACAGTGTACAAGTGTGTTTTGAAGAATTCTCGACCGATTGCTATCAAGCGACTATACAACCAGCATCCAAACAACGTAAGGGAGTTTGAGACAGAACTCGAAACCATTGGCAGCATCAGACATAGAAACCTTGTCAGCTTGCATGGTTATGCACTAACTCCAAATGGAAATCTCCTTTTCTACGACTACATGGAGAATGGCTCTCTGTGGGATCTTCTTCATGGCCCCATGAAGAAGCTACTGACTGGAAAGAAAGCAGTGCACAATGACTCTAACTTGCATCAATTGATATTGTCCAAGACAGATAACAACACTGTAATGGAGGCTGTGGATCTTGAGGTTTCTGTTACCTGCATAAATCAAGCCCATGTGAGGAAGACCTTTCAGCTTGCACTGCTTTGCACTAAAAGAAACCCTTCCGAGAGACCAACCATGCATGAGGTTGCCAAGGTCTTGGTGTCACTTCTCCCTGCACCTCCCAGTAAGAGTTTTTCCTCTCCTGCAAAAACCATTGACTATGCAAGATTTGTGATCGAGAAGGGACGACAAAGCCCAAAAATGGAATGGAAAGAACCTCAGCAACAGAACAATTCTTGTGATGCTCAATGGTTTATACGCTTTGGGGATGCTATATCCAAGAACACCCTCTAA 2658 0.4146 MEDGFMLFNMWKQERKHLFVVMAVFLLLSPFASSISEEGQALMGMKSSFGNVADVLLDWDDLHNDDFCSWRGVYCDNLTLTVLTLNLSSLNLGGEISPAIGDLRNLQSIDLQGNKLTGQIPDEIGNCAALVHLDLSDNELYGDIPFSISKLKQLEFLNLKNNQLTGPIPSTLTQIPNLKTVDLARNRFTGEIPRLLYWNEVLQYLGLRGNMLSGTLSPDICQLTGLCDVRGNNLTGTIPESIGNCTSFQILDISYNQITGQIPYNIGFLQVATLSLQGNRLTGKIPEVIGLMQALAILDLSENGLVGPIPPVLGNLSFTGKLYLHGNMLTGPIPPELGNMSKLSYLQLNDNKLVGRIPEELGKLEHLFELNLANNYLEGSIPHNISSCTALNKFNVHGNRLSGSVPLSFRSLGSLTYLNLSENNFKGSIPFELGHIINLDTLDLSRNNFSGQVPSSVGDLEHLLTLNLSHNHFNGTLPAEFGNLRSVQIIDMSFNNLSGSIPPEIGQLQNLVTLILNDNGLHGKIPDQLTNCFSLSALNVSYNNLSGTIPPMKNFSRFLYDSFIGNPLLCGNWLGSRCGSYISKSRVTFSRAAIVCLTVGILALLAMVIVAMFRLSQSMELIKGSSGTGEGSPKLVILHMDMAIHTFDDIMRSTENLSEKYIIGYGASSTVYKCVLKNSRPIAIKRLYNQHPNNVREFETELETIGSIRHRNLVSLHGYALTPNGNLLFYDYMENGSLWDLLHGPMKKLLTGKKAVHNDSNLHQLILSKTDNNTVMEAVDLEVSVTCINQAHVRKTFQLALLCTKRNPSERPTMHEVAKVLVSLLPAPPSKSFSSPAKTIDYARFVIEKGRQSPKMEWKEPQQQNNSCDAQWFIRFGDAISKNTL 885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1469 885 Pfam Protein kinase domain 660 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1469 885 Pfam Leucine rich repeat N-terminal domain 37 76 IPR013210 -
Dere06g1469 885 ProSiteProfiles Protein kinase domain profile. 657 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1469 885 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 200 307 - -
Dere06g1469 885 SUPERFAMILY Protein kinase-like (PK-like) 645 828 IPR011009 -
Dere06g1469 885 ProSitePatterns Protein kinases ATP-binding region signature. 663 685 IPR017441 GO:0005524
Dere06g1469 885 Gene3D Transferase(Phosphotransferase) domain 1 746 832 - -
Dere06g1469 885 SMART LRR_typ_2 484 508 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 103 127 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 151 174 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 364 388 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 460 483 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 175 199 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 412 436 IPR003591 -
Dere06g1469 885 SMART LRR_typ_2 340 363 IPR003591 -
Dere06g1469 885 SUPERFAMILY RNI-like 228 551 - -
Dere06g1469 885 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 308 581 - -
Dere06g1469 885 Pfam Leucine Rich repeat 244 260 IPR001611 GO:0005515
Dere06g1469 885 Gene3D Ribonuclease Inhibitor 270 356 IPR032675 -
Dere06g1469 885 Gene3D Ribonuclease Inhibitor 35 198 IPR032675 -
Dere06g1469 885 Gene3D Ribonuclease Inhibitor 455 580 IPR032675 -
Dere06g1469 885 Gene3D Ribonuclease Inhibitor 357 454 IPR032675 -
Dere06g1469 885 Gene3D Phosphorylase Kinase; domain 1 628 732 - -
Dere06g1469 885 Pfam Leucine rich repeat 104 164 IPR001611 GO:0005515
Dere06g1469 885 Pfam Leucine rich repeat 438 497 IPR001611 GO:0005515
Dere06g1469 885 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 628 732 - -
Dere06g1469 885 Gene3D Ribonuclease Inhibitor 199 269 IPR032675 -
Dere06g1469 885 SUPERFAMILY RNI-like 64 310 - -
Dere06g1469 885 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 35 199 - -
Dere06g1469 885 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 471 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1469 Dere-ChrDere06 27630114 27637635 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1469 748 885 Receptor kinase-like Gene Family AT5G07180 55.072 6.62e-34 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIb Dere06g1469 Pkinase 7.2e-11 CL0016