Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1456 ATGCGAACTCGCTTCCTCCACCTCCTGCTCCCTCGCGTTCCTTCTCCTCCTACTCCCTCCTCCGCCGTTGAACACCACCTCCGCTTCGACTCCTCCCTCCGCGTTTCCCTTCAAGCCGACTCGTTGTTGCCTATCGATTCCGTTCTCTCCAAGCTACTCCCCGATGTACTCCCTCACATCATCGATGTTCACTTTCAAGATTTTGATGCTTCTCTTCCGTCGTCCGATCAAAATCGTTTCTCCTCCTTAGTTAGAGCCATTGGAACTCAAATTCGTATTGTTCAGAGGAGAATAAATGGCCTGTTCCTAGTGATAAGAACGAAAGCGCTTGAAAATGCTTGCTTCCCCGTGGAGATTTGGATGCAAATGCTGTCTGAAGCCCCAGGAACCGACAATAATCTGGAAATGCTCAAGCTTGATTTCCCGACAAACTACCCTTATGACGTTCTGGAATCAATATTTTTAGTTGAAGATGTTACATCGGATTACCTTATTAGACATAATGCTCATTCTTTAGGAAAAAAATTTCTGTTCAGAATCTGCCACAAGCTAGCTAAAGACTTAATTCAAAACTTGGAAATCTTATTTGAGGCGAAAGCATTGAATGATCCAGAAAGAAGTGGTTGTGTGTTTGAGGAAAGGTTTCCCTTCAAGAGTTTCAATGAATTGGATTGCACTAAGAGGTTGGATGAAGCTACTGGCTTAGGAATTCATACCCAAGTCATCAAGTTTGGATTTTATGAAGATATTTTTGTTGGAAATTCTTTGATGAACCTGTATATGACACGTGGGTTGTTAAATAATGCCAAGAAGCTGTTTGATGAAATGCAGGTGAGCGACATTGTCACCTCGAACTCAATGATTATTGGATTTTTGAGAAATAGAGAGCTTGACAGTGCATTGGATTTGTTCAAGTGGATGAGTAAGAAGAATATCATAACTTGGAACTCCATTATTACGGGGTTAGTTCAAGGTGGCCAACCAAAAGAGTCGCTACAACTTTTCCATGAAACGCAGGTCTCAAGTGATGATAATATGGTTGAACCTAACAAGGTTACAATAGCTAGTGTCCTTTCAGCTTGTGCTCAACTTGGTTCTATAGATCATGGGAAATGGGTGCATAGTTATCTGATAAGAAATGGCCTAGAGTGTGATGTTGTAATTGGAACAGCACTTGTGAATATGTATGAGATGCAAAAAGCTAGAGTGAAACCTAATCATGTTCCATTTGTCAGATTATTGTTTGCTTGTGCTCATTCTAGTTTGGTAGAGAAAGGTCAGTGGTGCTTTGACATGATGTTATGTGTTTACTCAATGGAACCTCAAGTTTATCACTATGCTTGCATGGTTGACATTTTAAGCCGAGCCAAACTCTTTGAAAAGCCTCTTAATCATGCTTTCTATATGAACTTGTGTGACATATATGCCAAAGCTAGCAAGTTTGATGCCGCTAAAAGAGTTAGGAACTTAATGAAAGAGAGAGGAATCCAAAAGGAAATCCCAGGTTGCAGCATGATTAAAATTGGTGGGATGGTTCATGAATTTTCTGCAGGAGTATCATTGAAACTTGCAATGGAAGCAGTTTTGCCACTGTTCAGTAAACCCACATTTCAGCCTTTCCCTGCAACGAGATTCATGGATAATCGCTTTGCTCTGAAACCTCAGCTTTTAACACTGGTGGCTTTACTTTTTGCTTTTGTTCTAATCAAATTCCACGGCAGAAGATTTTCTGACAGAAGAAGATACCACCCAGTTGCTGGCACTGTATTGAACCAACTGTTCAACTATCATAGGCTGCTCGACTACGTCGCTGAGCTCACAAGTCAAAGGAAAACTTACAGGTTGCTTAGCTTCTTGAGAAATGAGGTGTACACTGCAGACCCAGTTAATCTTGAGCATGTTCTCACAGCAAGCTTTGCAAACTACGGCAAGGGTTGGTTTCATCAGAGGATGGCTGCAAGCCATCAATTCTTCCCCAAGTTATTGAGAGATTTCAGCAGTTCAGTGTTTAAATCCAATGCAGTAAAGCTTGCAGGGATTGTCTCTGAAGCAGCAATTTCAAACAACACTATTGAGCTCCGGGATCTGTTCATGAAGTCAGCTCCAGATTCAGTGTTTAAGGTTGTGCTTTGTGTAGAACTAGACATCATGTGTGGAAACTATGAAGAAGGTACCCGGTTCTCCAGTGCTTTTGATGAAGCAAGTGCAGCTACCATGTATCGATATGTTGACATTTTCTGGGAGATCAAGCGGCTCTTGGACATTGGATCAGAAGCAATACTTAGAAACAATATAAGAGTAATAGACAAATTTGTGTATGAAGTAATCAGAAGCAAGACTGAGCAAGTCCAAAAGCTACAGGAAGATGTGACTGAAAAGGTCGCACAAGAAATCTGGGAGGCAACAACAGTAGGAAGTGGCTTAAGCACCAAAGAGCTTGCAGCTAGAGTAACTGAAGATGCCCTTGAAAAGATGCAGTATCTGCCTGCAGCTTTGTCAGAAACAATCAGGTTCTACCCAGCAGTTTCCCTGGAAGGTAAGTATTGTTTTTCAGATGACATATGGCCAGATGGATTTAGTGTGAGGAAAGGTGATCTAATATCATTCTGCCCTTATGCCATGGGAAGGATGAAGTTTTTATGGGGGGATGATGCTGTGTTAGTTCAACCAGAGAGATTGCTTGATGAAAAAGGAGTTTTAATATAA 2706 0.4143 MRTRFLHLLLPRVPSPPTPSSAVEHHLRFDSSLRVSLQADSLLPIDSVLSKLLPDVLPHIIDVHFQDFDASLPSSDQNRFSSLVRAIGTQIRIVQRRINGLFLVIRTKALENACFPVEIWMQMLSEAPGTDNNLEMLKLDFPTNYPYDVLESIFLVEDVTSDYLIRHNAHSLGKKFLFRICHKLAKDLIQNLEILFEAKALNDPERSGCVFEERFPFKSFNELDCTKRLDEATGLGIHTQVIKFGFYEDIFVGNSLMNLYMTRGLLNNAKKLFDEMQVSDIVTSNSMIIGFLRNRELDSALDLFKWMSKKNIITWNSIITGLVQGGQPKESLQLFHETQVSSDDNMVEPNKVTIASVLSACAQLGSIDHGKWVHSYLIRNGLECDVVIGTALVNMYEMQKARVKPNHVPFVRLLFACAHSSLVEKGQWCFDMMLCVYSMEPQVYHYACMVDILSRAKLFEKPLNHAFYMNLCDIYAKASKFDAAKRVRNLMKERGIQKEIPGCSMIKIGGMVHEFSAGVSLKLAMEAVLPLFSKPTFQPFPATRFMDNRFALKPQLLTLVALLFAFVLIKFHGRRFSDRRRYHPVAGTVLNQLFNYHRLLDYVAELTSQRKTYRLLSFLRNEVYTADPVNLEHVLTASFANYGKGWFHQRMAASHQFFPKLLRDFSSSVFKSNAVKLAGIVSEAAISNNTIELRDLFMKSAPDSVFKVVLCVELDIMCGNYEEGTRFSSAFDEASAATMYRYVDIFWEIKRLLDIGSEAILRNNIRVIDKFVYEVIRSKTEQVQKLQEDVTEKVAQEIWEATTVGSGLSTKELAARVTEDALEKMQYLPAALSETIRFYPAVSLEGKYCFSDDIWPDGFSVRKGDLISFCPYAMGRMKFLWGDDAVLVQPERLLDEKGVLI 901
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1456 901 SUPERFAMILY Cytochrome P450 582 897 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1456 901 Pfam Cytochrome P450 789 898 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1456 901 FunFam Pentatricopeptide repeat-containing protein chloroplastic 236 385 - -
Dere06g1456 901 Gene3D Cytochrome P450 789 900 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1456 901 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 280 314 IPR002885 -
Dere06g1456 901 Gene3D Cytochrome P450 589 788 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1456 901 PANTHER PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 397 460 IPR046960 GO:0003723|GO:0009451
Dere06g1456 901 NCBIfam pentatricopeptide repeat 313 337 IPR002885 -
Dere06g1456 901 Pfam PPR repeat 254 280 IPR002885 -
Dere06g1456 901 Pfam PPR repeat 282 311 IPR002885 -
Dere06g1456 901 Pfam PPR repeat 473 496 IPR002885 -
Dere06g1456 901 Pfam PPR repeat 313 337 IPR002885 -
Dere06g1456 901 Gene3D Tetratricopeptide repeat domain 311 396 IPR011990 GO:0005515
Dere06g1456 901 Coils Coil 776 796 - -
Dere06g1456 901 Gene3D Tetratricopeptide repeat domain 217 310 IPR011990 GO:0005515
Dere06g1456 901 Gene3D Tetratricopeptide repeat domain 397 507 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1456 Dere-ChrDere06 27468946 27481866 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1456 556 896 Cytochrome P450 AT2G44890 35.000 1.31e-72 246