Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1453 ATGCGAACTCGCTTCCTCCACCTCCTGATCCCTCGCGTTCCTTCTCCTCCTACTCCCTCCTCCGTTGTTGAACACCACCTCCGCTTTGACTCCTCCCTCCGCGTTTCCCTTCAAGCCGACTCGTTGTTGCCTATCGATTCCGTTCTCTCCAAGCTCCTCTCCGATGTACTCCCTCACAGCATCGATGTTCACTGTCAAGATTTTGATGCTTCTCTTCCGAAGAAGCTGAGATCGTCTGTGAAGAGAATGAAATGGAGGACCGCAGAACTTTTGGGCTCTGTACCTGATATTAAATGTCCAAAATCGTATTGTTCACAAGAGAATAAATGGCCTGTTCCTAGTGATAAGAACGAAAGCGCTTGTAAGATAATTCTATTCGAAACACCTGAGCTGGATGTATTTCTGGAAAATGCTTGCTTCCCCGTGGAGATTTGGATGCAAATGCTGTCTGAAGCCCCAGGAACTGACAATAATCTGGCCATAAATAGACATGTCCATTGGCTTAGATATGTGTCCATGAAGCAGATAATTGGAATTTCAATATTGCTGACTTTGTTCCTTGAGGAGGACTTAATTCAAAACTTGGAAATCTTATTTGAGGCGAAAGCATTGAATGATCCAGAAAGAAGTGGTTGTGTGTTTGAGGAAAGGTTTCCCTTCAAGAGTTTCAATGAATTGGTCGTTACTAGTGAGATAGCACTAATAGATGACACATTCAAATTGCTGCCTTTGCCTGTTATCTCTGATTATGGAAAGATAAAATCACTGTATGTAGTCATTGGAGGGATGTTTTCTAATTTGAAGACTCATCAGCTATCTGCATCTGATGGAATCTACTTGAACTGGGATTTTCTGGAAGAAGATAAATGCAATTTCAAAACGTATCACCATTATCAGGATATGTGGACCAAGATAGACCTGAGCAACATACATTTTCAAGAAAAATCTTTTGATTATGAAATATTAGTGTTTGATCTTGTTTTCTCCAGCGATACTATAGGTGGTTGTGACATAAACCAAATTGAAGATATGCAGAAGTTGATTTCTGGTTGCACTTCACTGCTTGATGATTATTCCATACGAGTTGCTTCCGGCGAACTGTCAGATGATTTATTGCCTAAACAAGGTAATGGAGAACTATCATCAGCTGAAAGAGTTGTTGGGAGGGCCCCGCTGTTCTTCAGGTCTATGTCAGAAACCAGTAATCTTGATTATTTCTTAGACCCTCAGAAAGCTAATGCTATTGGGAATTGTAAGTTTGCAGTAGAATCCACTGATGCTAATGTTAATGTTCAAAAGGTTACATCCACTGACTTGAGGGCCTCATATAGTGAAATAGACCTGACAAATTTAGATATAGATAACTTAAACTTGCTGAGCCTTCAGGAACATAAACTGATGGAATGTCATGGAAATGGAAGCAATATGGCATATGTTGCATTATGTGCAATTAAATGGGCTGCTTGTGAGGAAACAGATACTAAAATGAAGGACCTTCTGATTTCAGACTGCTTGATAGTGTCCTATAAGTACATTTATTTTCAGAATGCGGAACTGCATGACCACAGTGCTCTTTTTGAATGTGTTGAAATGCCCATGTACACTGAATTGCTAATGGTTGTATATAAATATAGGGGAATAGGATTAGAGTTTGAATATTATGAAATGGAAAAATTCAGTGGCAAGAGACCTTCCCCAAGAGAAGGGGATTCGAGAGGCAAACATGGACTAGGTCAATGAAAATGTGACTCATCTAATTTTGGATCCCACGGAAAGTATGATGAATCAGAAGTCAGAGAGACTATGAACTTTTATCCTGTAGAGAACAACTACAATACAAGGTCATCAATGGCTGCAGATAAAGTAGATTGCTTTGTGCCTGCAACAATATCTGCAGTGAAATCTGAGAATGATCATCAGAGAATTGAGAATTTCCCTGAGACAGTGATTATCATGAATACTCAAACTGTAGATAAGGAAATGATAGTGTCTAGAAGAAGCACTTGCCAAGTGATCCTTGCAATGGAGAAAGGAGGAGCTCAAGTTGTTGAACGTGATTTAGATTTGTCAGCGGACATTATTATTAGTTCAGCTATTTGTTTGGTGTGGTATAATGATAAAAACCTTGGGAACAAGGAAACTCTAGTGACTGTAGCTTCTTCAAGCTTGCCTCTATGTATTGAGAATATTGCAACGGATGTCTTGACATTGCTGAGTTTCTCCTTCCACGGCTGCTTTCTGGTTTTTGATGGAGAATTTAGCTTTCTTTCAAGTGTTATGGAATCCTCAGATGGACTTTATGCTACAGCAGCGAGCCTTGGAATTAATTTGCACATCTTCTTTTCTTACTCACCGAAGTTTTCAAATGAAATTATCATAAACTGCATCAAGTATGCTGCCAAATTGACAAGGGACCTGTATTTTAAAATGCCTGACTCAGTTACTCTTGCAGAGTCATTTCTTACAAAGTTTCGTTCAATAAATCCTTTGACATCACATGCTGAACTATCTTCAGGGGCCAGGCTTAGTGAATATGGGGAGCGAGAAGATTCAAAATCCATATTGACAGACTGTTCCTCTTCAATATCTTCTGGTCCAGACCCAGACAGGTGCCATTTTGATGAAATTGATGATGACAGAAAAAGAAGAAAACTCATAGGTAATCCTCATAAAGAACTAAGTTTTGATCAATTGCTGCAGATTGAGCCATTAGATGAAGTAGTTGATGGCTTCTTGGATTCTTCAAACCTGTCAAATTGTTGTAATCCTGGCATGTTCGAAGATGCTGGAAGATCCAGTAACTTTACAAACACTGGTTTGTCCATGAGTGATTTGTTTGGTAAAAAACAAGTGTTTAATGCTATTTCAATAAGAAATCCTTCCAAAGTATCACAGCCATTATGTGATTCATGGAACTGCGAAGCTTCCCAAATAATAGGGCAGCAAAAACAGCACAGTTTATCTTTGAAAACTAAAGAATTGGCTGAAGATGATAAACTGGATACTGCAATTATGAACCAAAAGTTGACTTGGCATGGCCTTAGTAATTCTGAGAATCTGCATGAGGACATTGCAGGTGAGATAGAGACCAGAGAAGGAAGAATAAAATTGCAACATTCTCAGTTGATCACAGCAGTCACCCTGAGGCCAACTCTTCAAATAACTGGAAAATTTTTAAATGATACAGAAGGGGAAGTTAATCATTTTATTAAATTAGATTTGGTAAAAGTTGCCTGTCCTCCTGTTACTTCCAAGAAGCTGCATGAGACAGTCACGGGCAAGGTTGCTGACTTAGCAGACTATCCCCTGCTATACAAAAGGCACCATGAGAGGAAGTCTGAAGAGGGCTTTACTCAGGAACCTATGAGAAACTCTCAAGGAATACCCTTCCAGGAGGAGATGTCACATTTAGGTGGCACTCCACTCCTATGTTCCTTAAAGAGGAAAAGTAGCAAAGTGATCCTTCTACTGTCGAGCTCTTCAAGTACCATGGGAATAGAACTACTGGAGTTATCCCAGGACAGAAAAGGCAAAATCAATTTGTTCAATCTTCAAACCCAGCCAAGAATAGAAAGCATTCAGCTTTCATGCTTCCCCCATTCACCCTTACTAAAAAGAAAGCAAGGAAGTGGATGGCAGATACATACTCTTGCAATGAATGAAAGTGGAAGCCAGATTAGGCTGGTCTGGAGAGATGGAATCCTAGGTCTAACAAAGAAGCTCTTGGATGATTATCTTCCAGGCTGTTCATCTAGTCACTTAAACTTCCATCTGATGCTGAACCCGCCAACCGGTCTATGTTTGGCCCCCTATGCACATGGGTTTTATAGCATAGGACCGAACAGAGAAAAAGAAGAGAGAAACAGTGGAGGCATGGCGCTCGGTGTAGCTCCTCATCCCTTGACATTTGTGGTGCACTTTCTGGCGATTGCTGGTATTGTCATGGTCTTGGTTTGGACCATACACTTCCGAGGTGGCTTAGCTTGGGACTCGTCAAACAAGAGCCTCATCTTCAATGTCCATCCTGTTCTTATGTTAATTGGCTTAGTTATTATTGGAGGTGAAGCCATCATAAGTTACAAATCTCTTCCTTTGGAGAAAGAAGTGAAGAAATTGATACACCTTGTTCTTCATGCCATCGCACTAGTACTTGGAGTAGTCGGAATTTGTGCTGCCTTCAAGTATCATAATGAAAGCAGCATTGCCAATCTGTACAGCTTACATTCCTGGCTCGGACTTGCGGTTATTGTCCTTTACGGCATCCAGTGGATCTATGGGTTTGTGATCTTTTTCTACCCTGGAGGGGACCCATCCCTGAGACGAGCATCACTTCCTTGGCACGTGCTATTTGGGCTTTTTGTTTATCTCTTGGCTATTGGCACAGCTGCTCTAGGATTTTTAGAGAAGCTCACTTTCCTTGAGAATTCAGGATTGGCAAAATACGGATCTGAGGCTTTGCTTGTTAACTTCACTGCCGTGGCTACTGTCTTATTTGGTGCCTTTGTTGTATTCTCTGCTGTTTCAAAGACTCCCGAAGCAGCAGACGATGACTATGCACCTATTTAG 4566 0.4071 MRTRFLHLLIPRVPSPPTPSSVVEHHLRFDSSLRVSLQADSLLPIDSVLSKLLSDVLPHSIDVHCQDFDASLPKKLRSSVKRMKWRTAELLGSVPDIKCPKSYCSQENKWPVPSDKNESACKIILFETPELDVFLENACFPVEIWMQMLSEAPGTDNNLAINRHVHWLRYVSMKQIIGISILLTLFLEEDLIQNLEILFEAKALNDPERSGCVFEERFPFKSFNELVVTSEIALIDDTFKLLPLPVISDYGKIKSLYVVIGGMFSNLKTHQLSASDGIYLNWDFLEEDKCNFKTYHHYQDMWTKIDLSNIHFQEKSFDYEILVFDLVFSSDTIGGCDINQIEDMQKLISGCTSLLDDYSIRVASGELSDDLLPKQGNGELSSAERVVGRAPLFFRSMSETSNLDYFLDPQKANAIGNCKFAVESTDANVNVQKVTSTDLRASYSEIDLTNLDIDNLNLLSLQEHKLMECHGNGSNMAYVALCAIKWAACEETDTKMKDLLISDCLIVSYKYIYFQNAELHDHSALFECVEMPMYTELLMVVYKYRGIGLEFEYYEMEKFSGKRPSPREGDSRGKHGLGQXKCDSSNFGSHGKYDESEVRETMNFYPVENNYNTRSSMAADKVDCFVPATISAVKSENDHQRIENFPETVIIMNTQTVDKEMIVSRRSTCQVILAMEKGGAQVVERDLDLSADIIISSAICLVWYNDKNLGNKETLVTVASSSLPLCIENIATDVLTLLSFSFHGCFLVFDGEFSFLSSVMESSDGLYATAASLGINLHIFFSYSPKFSNEIIINCIKYAAKLTRDLYFKMPDSVTLAESFLTKFRSINPLTSHAELSSGARLSEYGEREDSKSILTDCSSSISSGPDPDRCHFDEIDDDRKRRKLIGNPHKELSFDQLLQIEPLDEVVDGFLDSSNLSNCCNPGMFEDAGRSSNFTNTGLSMSDLFGKKQVFNAISIRNPSKVSQPLCDSWNCEASQIIGQQKQHSLSLKTKELAEDDKLDTAIMNQKLTWHGLSNSENLHEDIAGEIETREGRIKLQHSQLITAVTLRPTLQITGKFLNDTEGEVNHFIKLDLVKVACPPVTSKKLHETVTGKVADLADYPLLYKRHHERKSEEGFTQEPMRNSQGIPFQEEMSHLGGTPLLCSLKRKSSKVILLLSSSSSTMGIELLELSQDRKGKINLFNLQTQPRIESIQLSCFPHSPLLKRKQGSGWQIHTLAMNESGSQIRLVWRDGILGLTKKLLDDYLPGCSSSHLNFHLMLNPPTGLCLAPYAHGFYSIGPNREKEERNSGGMALGVAPHPLTFVVHFLAIAGIVMVLVWTIHFRGGLAWDSSNKSLIFNVHPVLMLIGLVIIGGEAIISYKSLPLEKEVKKLIHLVLHAIALVLGVVGICAAFKYHNESSIANLYSLHSWLGLAVIVLYGIQWIYGFVIFFYPGGDPSLRRASLPWHVLFGLFVYLLAIGTAALGFLEKLTFLENSGLAKYGSEALLVNFTAVATVLFGAFVVFSAVSKTPEAADDDYAPI 1521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1453 1521 Gene3D - 1295 1515 - -
Dere06g1453 1521 MobiDBLite consensus disorder prediction 562 592 - -
Dere06g1453 1521 PANTHER PROTEIN SHORTAGE IN CHIASMATA 1 4 164 IPR038824 GO:0007131
Dere06g1453 1521 ProSiteProfiles Cytochrome b561 domain profile. 1304 1507 IPR006593 -
Dere06g1453 1521 MobiDBLite consensus disorder prediction 562 577 - -
Dere06g1453 1521 SMART 561_7 1340 1466 IPR006593 -
Dere06g1453 1521 FunFam Cytochrome b reductase 1 1296 1516 - -
Dere06g1453 1521 Pfam Eukaryotic cytochrome b561 1340 1472 IPR006593 -
Dere06g1453 1521 CDD Cyt_b561_ACYB-1_like 1331 1474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1453 Dere-ChrDere06 27421489 27436372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1453 1284 1506 Chloroplast and Mitochondria Gene Families AT4G25570 67.713 9.27e-102 325