Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1441 ATGATCGAACCCAGACGCCCTCACTTCAGCCAACTCACGTGGTCTCACCTCCTTCTATTCCTTCTCCTGCCGGCGGTGTACCTCAGCGGCGGCGCCAATGCACAGTCTGCTACAGTACCGACAGCGGCACCGTCGTCGTCGATAGCGTCCCACCGCAATGACGTCAACCTTCCCGTTTTCGTCAAGGCCGTAGCCCTCCTCTGTGCGTTCATCTTCATCAGCATCTTTTCGGTTTACCTCAACCATTGGACCATGTTATTTGTCGCTGACCGGAACCAAACGGCCGGCGGTAGCGGCCTAGGTTGGAGGCGTTCCTTCTCTCCGGGAATCGGCCGGGAAGTCCTCAACAGTTTCCCGATCCTCGTGTATTCCACCATCAAAGACCTCAAGATCGGAAAAGGAGCGCTGGAATGCGCAGTCTGCTTGAGCGAGTTCAAAGACTACGAGAGTCTCCGATTGATACCAAAATGCAACCACTTATTTCACCCGGAGTGCATCGACGCCTGGTTAGCTTCGCATGTGACTTGTCCCGTTTGTCGCGCAAATCTGAAACCAGATTCCGGCGAAGTAGCCATCGAAGTACCGACTCAGTTGAACGCAAACGAATTGGACGAAGAAGGAGAAGAAAATTCTGGAAGCAGAGGTGAAGCAAGGGAAACAGAGCAGCGCGCAGTAGTGGAGCTGCCCAGCGAAGGTCAGACCAGTAGAAATTCTTGCGAAACAGATAGAGGCAACATGGATGAAGCTAGAGGGAAGCAAAGTCGAAATCGAAGATCGACATGGAGAATGTTCGGGAAGCTTCCGAGATCGAACTCGACGGGGCATTCACTGGTGGAACAACCTGGGAAGAACTGGGAGAGGAATACGCTGAGGTTGCCGGAGGACGTGCGCATGTATATTCTGCTGAATCATGCGACGATCGGCCGTTCTGCGAGCTACAATGTGGTCATGCCGATGAAAGGGATAGGGTGTTGGAGTGACAGTGAAGGAAGCAGCAGAAGTAAGAGGAACAGCTATATTGAACGACAAGATCGTCGGGTTTTGTCTCTGACGCCGCCAATTGTTCCTCGCAAGGATTAA 1080 0.5287 MIEPRRPHFSQLTWSHLLLFLLLPAVYLSGGANAQSATVPTAAPSSSIASHRNDVNLPVFVKAVALLCAFIFISIFSVYLNHWTMLFVADRNQTAGGSGLGWRRSFSPGIGREVLNSFPILVYSTIKDLKIGKGALECAVCLSEFKDYESLRLIPKCNHLFHPECIDAWLASHVTCPVCRANLKPDSGEVAIEVPTQLNANELDEEGEENSGSRGEARETEQRAVVELPSEGQTSRNSCETDRGNMDEARGKQSRNRRSTWRMFGKLPRSNSTGHSLVEQPGKNWERNTLRLPEDVRMYILLNHATIGRSASYNVVMPMKGIGCWSDSEGSSRSKRNSYIERQDRRVLSLTPPIVPRKD 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1441 359 ProSiteProfiles Zinc finger RING-type profile. 138 180 IPR001841 -
Dere06g1441 359 MobiDBLite consensus disorder prediction 207 225 - -
Dere06g1441 359 PANTHER RING FINGER DOMAIN-CONTAINING 40 187 - -
Dere06g1441 359 SUPERFAMILY RING/U-box 137 187 - -
Dere06g1441 359 CDD RING-H2_EL5-like 137 180 - -
Dere06g1441 359 MobiDBLite consensus disorder prediction 265 280 - -
Dere06g1441 359 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 188 IPR013083 -
Dere06g1441 359 MobiDBLite consensus disorder prediction 241 255 - -
Dere06g1441 359 Pfam Ring finger domain 137 180 IPR001841 -
Dere06g1441 359 SMART ring_2 138 179 IPR001841 -
Dere06g1441 359 MobiDBLite consensus disorder prediction 195 280 - -
Dere06g1441 359 FunFam E3 ubiquitin-protein ligase ATL6 101 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1441 Dere-ChrDere06 27286666 27288895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1441 16 343 Rapid Response to Elicitors AT3G05200 34.328 9.74e-46 159