Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1437 ATGGCTCCGCCGCCGGTGGAACACAACGGTGAATCCACGGCCGGTGACCCCCAGAGATCTATTCCGACGCCGTTTCTCACCAAAACGTATCAGCTCGTCGACGATCACTCCATAGACGATGTGATTTCGTGGAACGAAGATGGATCCACTTTTATCGTTTGGAACCCTACCGTTTTCGCCAGGGATTTGCTCCCCAAGTATTTTAAGCACAACAACTTCTCTAGCTTTGTTCGCCAACTCAACACCTATGGATTCAGAAAAGTTGTACCTGATCGGTGGGAATTCTCAAACGACTGTTTCCGCAGAGGCGAGAAACGGCTTTTGTGCGAGATACAGCGACGGAAGATTTCATCGCCAGCGACGCCGACGCCAACGGCAGCTGGAGCAAATCTGACAGTGGCATTTCCGGCGCCGTTGCCGGTGACTGCGATACCGACGGCGATGCCGATCATATCGCCATCAAACTCAGACGAGGAGCAAGTGATTTCGTCCAATTCATCGTCCTCGAAAGCCCCCTCTGAGCTCGTAGACGAGAACGAGAGGTTACGAAAAGAGAACGTCCAGTTGACGAAGGAATTAGCGGAGATGAGATCTCTGTGTAACAATATATTCTCTCTGATGTCGAATTACGCCAATAACCAAAAGGACAGCGTTTTGCCAAGCAAAGAGTCCGTGAAACCGTTGGATTTGATGCCGCCGACTCATAGTTCCGGCGAGGAAGAGCCGCCGGCGGTGGAGGATATAAATCCGAAACTGTTTGGGGTGGCGATTGGTGCGAAGAGAGCCAGAGAAGCCGGAGCAGGAGGTATGGAGGAAGACACACTGTTAAGCTTACATCAGCCAGGGCCAGCGGAAGTGAAATCTGAACCGTTGGATTGTCAGAATCATCGAGAGAATCAGGAAACACCGTGGCGCAATCAATGCCATATGGCAAATCAGAGAGTGTGCAATTAA 954 0.5115 MAPPPVEHNGESTAGDPQRSIPTPFLTKTYQLVDDHSIDDVISWNEDGSTFIVWNPTVFARDLLPKYFKHNNFSSFVRQLNTYGFRKVVPDRWEFSNDCFRRGEKRLLCEIQRRKISSPATPTPTAAGANLTVAFPAPLPVTAIPTAMPIISPSNSDEEQVISSNSSSSKAPSELVDENERLRKENVQLTKELAEMRSLCNNIFSLMSNYANNQKDSVLPSKESVKPLDLMPPTHSSGEEEPPAVEDINPKLFGVAIGAKRAREAGAGGMEEDTLLSLHQPGPAEVKSEPLDCQNHRENQETPWRNQCHMANQRVCN 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1437 317 PRINTS Heat shock factor (HSF) domain signature 76 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere06g1437 317 PRINTS Heat shock factor (HSF) domain signature 25 48 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere06g1437 317 PRINTS Heat shock factor (HSF) domain signature 63 75 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere06g1437 317 Gene3D - 18 115 IPR036388 -
Dere06g1437 317 FunFam Heat stress transcription factor B-4 17 115 - -
Dere06g1437 317 MobiDBLite consensus disorder prediction 1 22 - -
Dere06g1437 317 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 261 IPR027725 -
Dere06g1437 317 Pfam HSF-type DNA-binding 25 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere06g1437 317 Coils Coil 179 199 - -
Dere06g1437 317 ProSitePatterns HSF-type DNA-binding domain signature. 64 88 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere06g1437 317 MobiDBLite consensus disorder prediction 217 246 - -
Dere06g1437 317 SUPERFAMILY "Winged helix" DNA-binding domain 22 114 IPR036390 -
Dere06g1437 317 MobiDBLite consensus disorder prediction 150 178 - -
Dere06g1437 317 MobiDBLite consensus disorder prediction 150 173 - -
Dere06g1437 317 SMART hsfneu3 21 114 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1437 Dere-ChrDere06 27229139 27230185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1437 1 317 HSF AT5G62020 49.408 8.70e-95 281
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere06g1437 HSF_DNA-bind 2e-32 CL0123