Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1436 ATGGCGATGGCTTTCAATCTTCTACTTCACTGCCTTCTCGTTTTCCACCTCTGCTTTTTCCTCGCCACTGCCATTGAACACCATGACGAAGAAAACCCAGAAAAAAATCATCTCCTTTCTTTCAAAACCAGTCTCGAAAACCCCCGGCTTCTTGCTTCATGGAATCCCTCAACCCCACATTGCAACTGGGTTGGCGTCGCTTGCGAACGCGACCGGGTTACATCACTCTCTCTTCCAACTCGGGACCTCAATGGCCCCCTCTCTTCTTCCCTCTTCTCCCTTACTGGTCTCACCGTTCTCAACCTCTTCTCCAACGCACTCCTTGGCGATATTCCTCCGCAGATAGCTAATCTGAGAAACTTGAAAGAGCTCAATCTTAGTTATAATCTGCTTTCTGGGGAAATTCCGAACGTGCTCTGCGGTTTGACTCAGCTAAAAACTCTCGAACTCGGCTCCAACTCGTTCACGGGAAACATCCCGTTGGAGCTCGGGTCGCTGAAACAACTGCGTATCCTCGACCTCTCAGGCAATGCCCTCACCGGAACCGTACCGGACAGTATCGGAGACCTGAGAGAGCTTCAATTCCTTGACCTCAGCAACAATCTTCTCTCAGGTTTTCTCCCCTTAACACTCTTCACTGGAACTCTGTCTTTGATTTCCCTTGACGTTTCAAACAATTCATTTTCTGGTTCGCTACCACCGGAAATCGGTAACTTGAGGAATATCACTGCCCTTTACATTGCCAATAATAAATTTACCGGTAGGTTGCCCCCTGAGGTTGGCGAGCTTTGGCGGCTTCAAGTGTTTTATGCACCTTCTTGTTCCATAGAAGGTCCATTGCCTGAAGAAATGTCGAAACTGAAGTCAATGTCGAAACTTGACCTTTCTTACAACCCCTTGAAGTGTTCGATCCCAAAGTTTATTGGGAAGCTGCAGAGCTTGAGAATACTGGACCTTTCTTTCGCGCAGCTTACTGGGTCCATACCATCTGAGCTTGGAAATTGTAGGAATTTGGGGTCTGTGATGCTTTCTTTCAACTCGCTTTCTGGGTCATTGCCAGAGGAGCTTTCTGAGCTCCCCATAGTGACATTCATAGCTGAAAAGAATGATTTTCATGGACATTTGCCTACTTGGCTTGGAAAGTGGAATCGTATTTATACTCTTTTGCTTTCCGAGAATCGATTTTCTGGGAAAATTCCTCCTGAGCTCGGGAATTGCTCTTCATTGGAGCACCTTAGTTTCAGAAGTAACTTGCTGACCGGTCCCATACCCAAGGAGCTTTGTTATGCTGCTTCACTTTCGGAGATTGATCTTGAAGAGAACTTCCTTTCCGGTACCCTTGAGAAAGCATTTGTTAAGTGTAAGAACCTTACCCAGTTGGTTTTGATGAGAAATCAGATCGTTGGTTCTATACCCCAGTACCTTTCGGAACTTCCTTTGATGTTGCTTGACCTAGACTCAAACAACTTTAGTGGACGCATACCCTCAAGTCTCTGGAATTCAACAACTCTGATGGAATTTTCTGCTGCTAATAACCGTTTGGAGGGCACTCTTCCTGTGGATATTGGGAATGCAGTTCTTCTAGAGAGGCTTGTTCTTAATAACAATCAACTGACAGGTACAATACCGAAGGAAATTGGAAGGCTCACAAGCCTATCTGTTCTTAATTTGAACGGAAATCTACTTGAAGGGAATATTCCATCCGAGCTAGGTGATTGCAGTTCACTGACAACTTTGGACCTTGGAAATAATAAACTAAGTGGGTCTATTCCAGATAAAATAGTGGAGCTAAGCCAATTACAGTGTCTCGTTCTGTCCCATAACAATCTGTCTGGTTCAATTCCTGCAAAACCATCTTCATATTTTAGACGACTTGTCATCCCTGATTTGAGCTTTGTTCAACACCTTGGAGTATTTGATCTGTCCCATAATAAATTGTCTGGGACTATACCTGATGAATTGGGGGGCTGTATGGTCGTTGTGGATCTTTTGATCAGCAACAACATGCTTTCCGGGAGTATTCCAAGGTCACTCTCTCTCCTGACAAATCTTACAACTCTGGATTTGTCTAATAACTTCTTGTCAGGTTCTATTCCACCAGAACTTGGAGATTCCCTCAAGCTACAAGGATTATATCTGGGATATAATCAGCTTAGAGGTACTCTCCCTGCAAGTTTTGGAAAAATGAGTAGCTTGGTGAAGCTAAATTTAACAGGAAATAAGTTGTCTGGTCCAATTCCAATTAGTTTCGGGAACATGAAAGAGCTGACTCACTTGGATTTGAGCTTTAATGAGCTCAGTGGCCAGCTTCCATCCTCTCTATCAGGTTTTCAAAGTCTTGTTGGTCTTTATGTGCAGCAGAACAAGCTCTCTGGCCAAATGGAGGCGCTTTTCTCCAACTCCATGATATGGAGGATTGAGACAATGAATTTGAGTGATAATTGCTTCAACGGGGATTTGCCAAGTTCTTTGGGAAACCTTTCATACTTGACAAATTTGGATCTTCATGGAAATATGTTTACGGGAGAGATTCCTTCAGAACTTGGGAATTTAGTGCAGCTGGAGTATTTTGATGCTTCTGGGAACAGTTTATATGGAAGGATTCCTGAGAAAATTTGCAGCCTTGTTAATCTGAACTACCTTGATTTGTCTCAAAACAGATTGGAAGGGCCTATACCCAGAAGTGGTATTTGCCAGAATCTATCCAGAATTAGATTTACAGGGAACAAAAATCTTTGTGGACGAATTTTGGGTATTGATTGTCCGATCAAAGAAATTGGTAGATTTGCATTGTTTAATGCATGGCAACTTGCCGGAATTGCGATTACAATCACACTAATGACTCTAAGCATTGTATTTGTTTTACACAGATGGATTAGCAGGAGGCAAAATGATCCTGAGGAACTTGAGGAACACAAACTGAACAACTATGTGGATCAAAATCTTTATTTCTTGAGCAGTAGCAGATCAAAGGAACCTCTGAGTATAAACGTAGCAATGTTTGAGCAGCCTCTTCTGAAACTAACTTTGGAGGATGTCCTTGAAGCTACTGGGAACTTCAGCAGGACAAACATAATTGGAGATGGAGGTTTTGGGACTGTGTACAAGGCCACTTTACCTAATGGCAAAATAGTTGCTGTGAAGAAGCTGAGTGAAGCTAAGACACAGGGCCATCGCGAGTTCATGGCTGAAATGGAAACTTTAGGCAAGGTGAAGCATCAGAATCTTGTTCCACTTCTTGGATATTGCTCCATGGGTGAGGAGAAACTCCTTGTTTATGAATATATGGTAAATGGAAGCTTAGATCTATGGTTGAGAAATAAGACTGCTGGGGCCCTGGAAATCCTTGACTGGAACAAAAGGTACAAAATTGCAACTGGTGCAGCCAGAGGATTAGCTTTCCTTCACCATGGGTTCATTCCTCACATCATTCACAGGGATATTAAAGCTAGCAACATATTGCTGAATGAAGATTTTGAGCCTAAAGTTGCAGATTTTGGACTTGCAAGGCTTATTAGTGCCTGTGAGACCCATATCACCACTGACATTGCAGGAACATTTGGGTACATTCCACCAGAGTATGGACAGAGTGGGAGGTCCACAACCAGAGGAGATGTCTACAGCTTTGGGGTCATTTTGCTCGAATTGGTGACAGGGAAAGAACCAACTGGACCTGGCTTTAAGGACATTGAAGGTGGGAATTTGGTTGGGTGGGTTTTTCTGAAGATCAAGAAGGGGCGGGCTGTTGATGTTCTTGATCCAACGGTTCTGGATGCAGATTCAAAGCAGATGATGCTTCAGATGCTACAGATTGCTTGTGTATGCCTCTCTGATAATCCTGCAAACAGGCCTACTATGCTTCAGGTGCTTAAGTTTTTGAAGGGGATCAAAGGAGAGTAG 3900 0.4351 MAMAFNLLLHCLLVFHLCFFLATAIEHHDEENPEKNHLLSFKTSLENPRLLASWNPSTPHCNWVGVACERDRVTSLSLPTRDLNGPLSSSLFSLTGLTVLNLFSNALLGDIPPQIANLRNLKELNLSYNLLSGEIPNVLCGLTQLKTLELGSNSFTGNIPLELGSLKQLRILDLSGNALTGTVPDSIGDLRELQFLDLSNNLLSGFLPLTLFTGTLSLISLDVSNNSFSGSLPPEIGNLRNITALYIANNKFTGRLPPEVGELWRLQVFYAPSCSIEGPLPEEMSKLKSMSKLDLSYNPLKCSIPKFIGKLQSLRILDLSFAQLTGSIPSELGNCRNLGSVMLSFNSLSGSLPEELSELPIVTFIAEKNDFHGHLPTWLGKWNRIYTLLLSENRFSGKIPPELGNCSSLEHLSFRSNLLTGPIPKELCYAASLSEIDLEENFLSGTLEKAFVKCKNLTQLVLMRNQIVGSIPQYLSELPLMLLDLDSNNFSGRIPSSLWNSTTLMEFSAANNRLEGTLPVDIGNAVLLERLVLNNNQLTGTIPKEIGRLTSLSVLNLNGNLLEGNIPSELGDCSSLTTLDLGNNKLSGSIPDKIVELSQLQCLVLSHNNLSGSIPAKPSSYFRRLVIPDLSFVQHLGVFDLSHNKLSGTIPDELGGCMVVVDLLISNNMLSGSIPRSLSLLTNLTTLDLSNNFLSGSIPPELGDSLKLQGLYLGYNQLRGTLPASFGKMSSLVKLNLTGNKLSGPIPISFGNMKELTHLDLSFNELSGQLPSSLSGFQSLVGLYVQQNKLSGQMEALFSNSMIWRIETMNLSDNCFNGDLPSSLGNLSYLTNLDLHGNMFTGEIPSELGNLVQLEYFDASGNSLYGRIPEKICSLVNLNYLDLSQNRLEGPIPRSGICQNLSRIRFTGNKNLCGRILGIDCPIKEIGRFALFNAWQLAGIAITITLMTLSIVFVLHRWISRRQNDPEELEEHKLNNYVDQNLYFLSSSRSKEPLSINVAMFEQPLLKLTLEDVLEATGNFSRTNIIGDGGFGTVYKATLPNGKIVAVKKLSEAKTQGHREFMAEMETLGKVKHQNLVPLLGYCSMGEEKLLVYEYMVNGSLDLWLRNKTAGALEILDWNKRYKIATGAARGLAFLHHGFIPHIIHRDIKASNILLNEDFEPKVADFGLARLISACETHITTDIAGTFGYIPPEYGQSGRSTTRGDVYSFGVILLELVTGKEPTGPGFKDIEGGNLVGWVFLKIKKGRAVDVLDPTVLDADSKQMMLQMLQIACVCLSDNPANRPTMLQVLKFLKGIKGE 1299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1436 1299 Gene3D Ribonuclease Inhibitor 140 214 IPR032675 -
Dere06g1436 1299 SMART LRR_sd22_2 753 779 - -
Dere06g1436 1299 SMART LRR_sd22_2 573 599 - -
Dere06g1436 1299 SMART LRR_sd22_2 142 163 - -
Dere06g1436 1299 SMART LRR_sd22_2 166 192 - -
Dere06g1436 1299 SMART LRR_sd22_2 875 903 - -
Dere06g1436 1299 SMART LRR_sd22_2 681 713 - -
Dere06g1436 1299 SUPERFAMILY L domain-like 39 301 - -
Dere06g1436 1299 Gene3D Ribonuclease Inhibitor 215 362 IPR032675 -
Dere06g1436 1299 Gene3D Ribonuclease Inhibitor 621 923 IPR032675 -
Dere06g1436 1299 Gene3D Ribonuclease Inhibitor 363 620 IPR032675 -
Dere06g1436 1299 ProSiteProfiles Leucine-rich repeat profile. 683 705 IPR001611 GO:0005515
Dere06g1436 1299 SUPERFAMILY L domain-like 368 651 - -
Dere06g1436 1299 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1143 1155 IPR008271 GO:0004672|GO:0006468
Dere06g1436 1299 SUPERFAMILY L domain-like 622 914 - -
Dere06g1436 1299 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Dere06g1436 1299 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 629 925 - -
Dere06g1436 1299 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 633 1294 - -
Dere06g1436 1299 SMART serkin_6 1020 1293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1436 1299 Gene3D Transferase(Phosphotransferase) domain 1 1096 1299 - -
Dere06g1436 1299 SMART LRR_typ_2 94 117 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 827 851 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 574 597 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 875 900 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 239 263 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 633 657 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 166 189 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 190 214 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 729 752 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 118 142 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 681 705 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 549 573 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 311 335 IPR003591 -
Dere06g1436 1299 SMART LRR_typ_2 753 777 IPR003591 -
Dere06g1436 1299 FunFam Leucine-rich repeat receptor-like kinase 33 141 - -
Dere06g1436 1299 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 142 210 - -
Dere06g1436 1299 ProSitePatterns Protein kinases ATP-binding region signature. 1026 1049 IPR017441 GO:0005524
Dere06g1436 1299 Pfam Protein kinase domain 1021 1291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1436 1299 ProSiteProfiles Leucine-rich repeat profile. 120 143 IPR001611 GO:0005515
Dere06g1436 1299 ProSiteProfiles Protein kinase domain profile. 1020 1299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1436 1299 FunFam leucine-rich repeat receptor protein kinase EMS1 213 362 - -
Dere06g1436 1299 FunFam Leucine-rich repeat receptor protein kinase EMS1 363 622 - -
Dere06g1436 1299 FunFam serine/threonine-protein kinase BRI1-like 2 981 1095 - -
Dere06g1436 1299 FunFam serine/threonine-protein kinase BRI1-like 2 1096 1299 - -
Dere06g1436 1299 Gene3D Ribonuclease Inhibitor 33 139 IPR032675 -
Dere06g1436 1299 Pfam Leucine rich repeat 165 203 IPR001611 GO:0005515
Dere06g1436 1299 Pfam Leucine rich repeat 682 742 IPR001611 GO:0005515
Dere06g1436 1299 Pfam Leucine rich repeat 551 610 IPR001611 GO:0005515
Dere06g1436 1299 Pfam Leucine rich repeat 96 154 IPR001611 GO:0005515
Dere06g1436 1299 Gene3D Phosphorylase Kinase; domain 1 982 1095 - -
Dere06g1436 1299 PRINTS Leucine-rich repeat signature 681 694 - -
Dere06g1436 1299 PRINTS Leucine-rich repeat signature 193 206 - -
Dere06g1436 1299 Pfam Leucine Rich Repeat 756 777 IPR001611 GO:0005515
Dere06g1436 1299 ProSiteProfiles Leucine-rich repeat profile. 192 213 IPR001611 GO:0005515
Dere06g1436 1299 SUPERFAMILY Protein kinase-like (PK-like) 1001 1293 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1436 Dere-ChrDere06 27216600 27220499 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1436 34 1296 Receptor kinase-like Gene Family AT5G07280 59.023 0.0 1410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dere06g1436 Pkinase 8.1e-46 CL0016