Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1431 ATGGCAGCGGGTATTGTCAAATGGGCCTTTTCGCTTAGATTTGGATATGATGCTCTTGAAAAGTCAAAAAGGAAAATGGAGGGGCATGTCGAGATGGGTCTTTTGGGGGAAAACTTCGATCCTAGTTTGATTGGGAGGATTAGGGACGATGGGTATGAAAGTCGTTCTGGGAGTGATAATTTTGAAGGCGTATCAGGGGAGGATGATCAGGATGCTGGTGATGACACACCCCAGAGGGCGAAGAAGTACCATAGACACACTCCTCACCAAATTCAAGAGCTTGAATCTTTCTTTAAGGAGTGTCCTCATCCTGACGAGAAGCACAGATTGGAACTTAGCAGGAGGCTTGGCTTGGAGACAAAGCAGGTCAAATTCTGGTTTCAAAATCGACGAACCCAAATGAAGACCCAGCTGGAGCGTCATGAGAATCTGATTCTGAGACAAGAGAATGACAAGCTGCGAGCAGAGAACAGCATGATGAAGGAAGCCATGGCAAACCCAATATGCAACAACTGTGGAAGCCCAGCCATTCCTGGCCAAATTTCATTCGAAGAACACCAGCTCAGAATCGAAAATGCTCGGCTCAAGGACGAACTGAACCGCATATGTACCTTGGCTAACAAGTTTCTGGGAAGGCCAATCTCACCCATGGCTCTTCCAAGCTCAAATTCTGGTCTAGAACTCGCCATTGGAAGGAACAACACTGGTGGGTCGAGCTTCGCAATGGGACTTGACTTGGGGATGATGATGGGAAATAATGATCAAGCACAGTTTGAGAGATCTATGCTTGTGGACCTTGCCTTGTCTGCTATGGACGAATTGATGAAGATGGCTCAGGGAGATACCCCTCTTTGGATGAAGAGTTTGAACGGCGAGAAGGAAGTTCTGAACCATGAGGAATATGCTCGGGTCTTCCCTCCTTGTCTTGGTCCAAAACCTGCAAGTTATGTCACTGATGCTACTAGAGACACTGGGGTAGTGATCATCAACAGTGTGGCCCTCGTTGAAACATTGATGGACGCGAATCGATGGGCGGAGATGTTTTCAACCATAGTTGCTAGAGCTGCGACCCTTGATGTCATATCAAATGGCGTGGGAGGAACCAGAAACGGTGCTTTGCAAGTGATGGATACTGAGATTCAATTGCTGTCGCCATTGGTGGCTGTTCGTCAACTGAGGTTGCTCCGATTCTGCAAGCAGCATGCAGAGGGGTTATGGGCTGTGGTAGATGTTTCAGTTGAGATAGGGCGTGACCCCACCAATGCACAACCATTCTTCACCAGCAGGAGGCTTCCTTCTGGCTGCGTTGTGCAAGATATGCCCAACGGTTACTCCAAGGTGACATGGGTGGAGCATTGGCAGTACGATGAGAGCGGGGTCCACCAATTGTACCGTCCGATGGTAAACTCCGGCATTGGCTTCGGTGCTTGTCGATGGATCGCCACCCTCCACCGGCAATGTGAATGCTTGGTCATCTTTATGTCCTCTCCCGTTCCTACCGATGAACACACCGCATTAAGCCAAGGTGGTCGGAGAAGCATGCTGAGGCTGGCACAACGCATGACGGACAACTTCTGCTCTGGGGTTTGCGCTTCTTCGGCCCGTAGATGGGACAACCTTCATGTGGGGACTCTTGGGGACGACGTGAAGGTGATGACACGGAAGAACGAGGATGAGCCAGGTGAGCCTCCGGGCATCATTCTGAGCGCCGCCACTTCGGTCTGGTTGCCGGTGTCGCAGCAAAGGCTGTTCGACTTCCTCCGCGATGAACGCCTGAGAAACGAGTGGGACATCTTGTCCAACGGCGGAGCCATGCAGGAAATGGTCCACATTGCCAAAGGACAGGGACATGGCAACTGTGTTTCTCTTCTTCGTGCTAACGGTGTTAATCGCAACGAGAGCAACATGCTAATATTGCAGGACACATGGACGGATGCCTCATGCTCAGTGGTAGTGTATGCACCAGTTGATGTGCAGTCGCTGAACGTGGTGATGAGTGGTGGGGATTCTTCATACGTCGCACTCTTGCCTTCTGGCTTCGCCATTCTCCCCGATGGTCGCACTGGGACTCCTCTGGGTGGTGGTAATAGCAGCGGCGGCGGCGGCAGCGGTGGCGGTGGAAGCCTACTTACAGTAGGGTTACAGATACTGGTGAGTAGCCTCCCAACAGGGAAGCTGACAGTGGAGTCCGTTGATACAGTGAACAATCTCATCTCCTGCACCGTTCAGAAGATCAAAGCCGCCATCAGAGTTGCATGA 2259 0.5117 MAAGIVKWAFSLRFGYDALEKSKRKMEGHVEMGLLGENFDPSLIGRIRDDGYESRSGSDNFEGVSGEDDQDAGDDTPQRAKKYHRHTPHQIQELESFFKECPHPDEKHRLELSRRLGLETKQVKFWFQNRRTQMKTQLERHENLILRQENDKLRAENSMMKEAMANPICNNCGSPAIPGQISFEEHQLRIENARLKDELNRICTLANKFLGRPISPMALPSSNSGLELAIGRNNTGGSSFAMGLDLGMMMGNNDQAQFERSMLVDLALSAMDELMKMAQGDTPLWMKSLNGEKEVLNHEEYARVFPPCLGPKPASYVTDATRDTGVVIINSVALVETLMDANRWAEMFSTIVARAATLDVISNGVGGTRNGALQVMDTEIQLLSPLVAVRQLRLLRFCKQHAEGLWAVVDVSVEIGRDPTNAQPFFTSRRLPSGCVVQDMPNGYSKVTWVEHWQYDESGVHQLYRPMVNSGIGFGACRWIATLHRQCECLVIFMSSPVPTDEHTALSQGGRRSMLRLAQRMTDNFCSGVCASSARRWDNLHVGTLGDDVKVMTRKNEDEPGEPPGIILSAATSVWLPVSQQRLFDFLRDERLRNEWDILSNGGAMQEMVHIAKGQGHGNCVSLLRANGVNRNESNMLILQDTWTDASCSVVVYAPVDVQSLNVVMSGGDSSYVALLPSGFAILPDGRTGTPLGGGNSSGGGGSGGGGSLLTVGLQILVSSLPTGKLTVESVDTVNNLISCTVQKIKAAIRVA 752
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1431 752 SMART HOX_1 79 141 IPR001356 GO:0003677
Dere06g1431 752 ProSiteProfiles START domain profile. 256 492 IPR002913 GO:0008289
Dere06g1431 752 Gene3D - 66 152 - -
Dere06g1431 752 FunFam Homeobox-leucine zipper protein HDG1 66 153 - -
Dere06g1431 752 MobiDBLite consensus disorder prediction 72 87 - -
Dere06g1431 752 Pfam START domain 266 489 IPR002913 GO:0008289
Dere06g1431 752 SUPERFAMILY Homeodomain-like 63 137 IPR009057 -
Dere06g1431 752 SUPERFAMILY Bet v1-like 517 746 - -
Dere06g1431 752 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 78 749 IPR042160 -
Dere06g1431 752 MobiDBLite consensus disorder prediction 46 87 - -
Dere06g1431 752 SMART START_1 265 489 IPR002913 GO:0008289
Dere06g1431 752 Pfam Homeodomain 81 135 IPR001356 GO:0003677
Dere06g1431 752 Coils Coil 131 166 - -
Dere06g1431 752 CDD homeodomain 81 137 IPR001356 GO:0003677
Dere06g1431 752 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Dere06g1431 752 SUPERFAMILY Bet v1-like 259 489 - -
Dere06g1431 752 CDD START_ArGLABRA2_like 260 488 - -
Dere06g1431 752 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1431 Dere-ChrDere06 27173557 27180013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1431 48 749 Homeobox Transcription Factor Family AT3G61150 58.696 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Dere06g1431 START 1.2e-47 CL0209