Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1427 ATGGGTTTCCTCCGGCGACTTTTCGGCGGCAAGAAATCGGGTTCTCCGGCAGGAGAGTCCGACAAGTCCCGGTCTGAACCGGGTAAGAGTAAACGCAGATGGAGCTTCATCAAACACACCAAAGACAAAGACAAATCACAAATTCCAACTTCTGATCTTAACGACACCGACCTTGCCAAATCTACGGCTTCATTCCCTGATCCCTTGAACGCTAACAAACATGCCATAGCCGTGGCGGCGGCGACGGCGGCAGTGGCGGAGGCAGCTCTTGCAGCCGCCCATGCCGCGGCGGAGGTTGTCAGGCTAACAAATGGCGGCGGCTGCGGTCCCAGTACTAGCATCCGACCAACCACCGCGGCGGCGCACGGTGGCTCGAGCCAGCACCGGTGGCCGGAAGAGATCGCCGCCGTTAAGATACAATCGACGTTTCGTGGTTACCTGGCAAAGCGAGCTCTAAGAGCACTGAAAGCATTGGTGAAGTTGCAAGCATTGGTGAGAGGTCACATAGTGAGAAAGCAAACTGCAGACATGCTGAGGCGCATGCAAACATTGGTACGGCTACAGTCCCGGGCACGTGCAAGTCGCGTGTACTTGTCTGATACTCTGTACTCTACCAAGTCTGCACTGTCCCAACACCCTGTCCCTGAAGATTATGAGTACCCACGTAGAGCCTATAGTACTAAATTTGAAGGATCTTCTGTCCTCAAGAGATGCAGTTCTAATGCAAATTTCAGGGACATTGGTTCGGGGAGAGCGAGGTTTGGATCACTTTGGTTCGACCAATGGGTGGAAGAGAATATTTGGAACCATCCCAGAGGAGACGATGAGAAGAGTGACAAAATTCTTGAAGTTGATACTTGGAAGCCACACTTGAACTCCCACAACGACAACCTCATGGCATATGACTCTCCATCGAAGTGTTCAACTAGAGCTCTGAACCATAGTCTCCTGACCTCTCTCAAGTATCAAAACAGGAAAGATGAAAAAGCTTCAAGAACAGCAGAGAACAGTCCAGAGGCATTTTCTATTTCAAGGAGAAGGGGTCCTTTCACACCCACAAGGAGCGAGTGTGGCTACTTGGGTCACCCTAACTACATGGCAAACACTGAGTCTTCTCGAGCCAAGGTTAGGTCAATGAGTGCCCCAAGGCAAAGGCTTTGGGACTCAGGGCCTAATTCAGATAGGCATGCTGATTTCAGAGGCCATTGGTTTACATCTTCATGCCACTTGAACAGAACTGGGAGTACCCATTTAAGGTGA 1260 0.5103 MGFLRRLFGGKKSGSPAGESDKSRSEPGKSKRRWSFIKHTKDKDKSQIPTSDLNDTDLAKSTASFPDPLNANKHAIAVAAATAAVAEAALAAAHAAAEVVRLTNGGGCGPSTSIRPTTAAAHGGSSQHRWPEEIAAVKIQSTFRGYLAKRALRALKALVKLQALVRGHIVRKQTADMLRRMQTLVRLQSRARASRVYLSDTLYSTKSALSQHPVPEDYEYPRRAYSTKFEGSSVLKRCSSNANFRDIGSGRARFGSLWFDQWVEENIWNHPRGDDEKSDKILEVDTWKPHLNSHNDNLMAYDSPSKCSTRALNHSLLTSLKYQNRKDEKASRTAENSPEAFSISRRRGPFTPTRSECGYLGHPNYMANTESSRAKVRSMSAPRQRLWDSGPNSDRHADFRGHWFTSSCHLNRTGSTHLR 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1427 419 MobiDBLite consensus disorder prediction 106 124 - -
Dere06g1427 419 SMART iq_5 154 175 IPR000048 GO:0005515
Dere06g1427 419 SMART iq_5 131 153 IPR000048 GO:0005515
Dere06g1427 419 MobiDBLite consensus disorder prediction 324 347 - -
Dere06g1427 419 PANTHER IQ-DOMAIN 5-RELATED 15 396 - -
Dere06g1427 419 MobiDBLite consensus disorder prediction 17 50 - -
Dere06g1427 419 MobiDBLite consensus disorder prediction 106 127 - -
Dere06g1427 419 ProSiteProfiles IQ motif profile. 156 183 IPR000048 GO:0005515
Dere06g1427 419 ProSiteProfiles IQ motif profile. 132 160 IPR000048 GO:0005515
Dere06g1427 419 Pfam Protein of unknown function (DUF4005) 324 396 IPR025064 -
Dere06g1427 419 Gene3D - 132 183 - -
Dere06g1427 419 Pfam IQ calmodulin-binding motif 156 173 IPR000048 GO:0005515
Dere06g1427 419 Pfam IQ calmodulin-binding motif 135 153 IPR000048 GO:0005515
Dere06g1427 419 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1427 Dere-ChrDere06 27129978 27132267 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1427 1 404 IQD Protein Family AT5G07240 45.498 2.28e-61 203