Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere06g1424 | ATGCACTACTCCGTGCTGCACCAAAACCAAACCATGAGCCTAAAGGCAATAATGACCATTGAAGATAGCTACCTCTTCTTCCCCGTCCTTCTTCTGGTACCTCTCTTCTTCATCGTCAAGCACACTCTCTCCAAGAAACCCCCTCTTCCACCAGGTCCATTTCCGTGGCCTTTGATCGGAAACATCTTCCAAATGGGCGACGGAACCCAACCCCTCTACGCCATTTTCGCCGACCTATCCAAGTCCTACGGCCCCCTCATCTCTCTGAAACTCGGCGCCCAAACCACCATTATCGCCTCATCCCAAGCTGCCGCTAGAGAAATCCTCAAAACCCACGATCGGTTTCTGTCCGGTAGGTACGTGACCGACGTGACCCCAGTTTTCTACCCTTTCACGCTGGGTTTCTCCGTGGAGTGCGGTGAGCAATGGAGGTACCTTCGAACCATCTGCAAAAGCGAGCTGTTTTCGAGCAGAGCAATGGAAGCTCAGGTGGGTCTGATGGAGAAGAAGGTGATGGACATGATTGAGTTCCTGGGTACGAAGGAGGGTGAGGTTGTGGATGTTGGAGGGATTGTGTATGCGAGTGTGTCGAATATGCTTACGAATGCTCTGTTTTCTGTGGATTTTCTGGATTTCGAAGGGAAGGGGATTGGGGAAGAGCTCAGGAATTTGATAGCGAGCGTGGGTGAGTTGGGACTTGTTCCGAATTTATCAAGTATGTTCTCGTTTCTGAGTGGGTTTGATATTCAGGGATTGGGGAAGAAGAAGATGGAGATTCTGGAAAAGATGGTGGGTGTTTGGAAGGGTATAGTTGAAGAAAGGAGAAAACAGGGGATTAATAGTGATCCATTGAGGAGAGATTTCTTAGACACGTTGATTGAAACTGGGTTCAACGATGGTCAGATCAACCAATTGATCCTGGAATTACTAATTGCAGGCACAGACACAAGCACCATGGCACTAGAATGGGCAATGGCAGATCTCATCAGAACCCAAGACGCCATGCAGAAACTGCAAGACGAGCTTCACAGCAAAATAGGCCAACACAACGTAGTAAGAGACTCCCATATGTCCCATCTTCCCTATCTGCAAGCCTGCGTGAAGGAGACCCTCAGACTTCACCCTCCAGGTCCACTTCTCCTTCCTCACAAGGCACTAGAGACTTGCCAAGTCATGGGGTACACTGTCCCAAAGGACTCTCTAATCTTCGTGAACATGTGGGGCATAGGACGCGATCCTGATTCGTGGGAGGACCCTTTGAGGTTCGACCCACAGAGGTTTGTGCAAAATGGGTTGGACTATAAAGGGATGGACTTTGAGTATGTGCCTTTTGGTGCAGGAAGGAGGATATGCCCTGGTCAGCCTTTGGCTGTTAGGCAGATGCCTCTGATCCTGGCTTCTTTGGTTCATTACTTTGATTGGTCCCTTCCTGATGGAATCGATGCCTCTGAAGTGGACATGAGTGAAAGGTTTATTGTAACTTTGAGGAAGAAGGTGCCCTTGCTGCTTGTTCCTAAAGTCAGAGACAAGAGCCTGTTCGATAGAATGAAGGAGATGAACTAG | 1563 | 0.4901 | MHYSVLHQNQTMSLKAIMTIEDSYLFFPVLLLVPLFFIVKHTLSKKPPLPPGPFPWPLIGNIFQMGDGTQPLYAIFADLSKSYGPLISLKLGAQTTIIASSQAAAREILKTHDRFLSGRYVTDVTPVFYPFTLGFSVECGEQWRYLRTICKSELFSSRAMEAQVGLMEKKVMDMIEFLGTKEGEVVDVGGIVYASVSNMLTNALFSVDFLDFEGKGIGEELRNLIASVGELGLVPNLSSMFSFLSGFDIQGLGKKKMEILEKMVGVWKGIVEERRKQGINSDPLRRDFLDTLIETGFNDGQINQLILELLIAGTDTSTMALEWAMADLIRTQDAMQKLQDELHSKIGQHNVVRDSHMSHLPYLQACVKETLRLHPPGPLLLPHKALETCQVMGYTVPKDSLIFVNMWGIGRDPDSWEDPLRFDPQRFVQNGLDYKGMDFEYVPFGAGRRICPGQPLAVRQMPLILASLVHYFDWSLPDGIDASEVDMSERFIVTLRKKVPLLLVPKVRDKSLFDRMKEMN | 520 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere06g1424 | 520 | FunFam | Predicted protein | 310 | 503 | - | - | |
| Dere06g1424 | 520 | Pfam | Cytochrome P450 | 50 | 489 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PANTHER | CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED | 26 | 506 | - | - | |
| Dere06g1424 | 520 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506|GO:0016705 | |
| Dere06g1424 | 520 | Coils | Coil | 321 | 341 | - | - | |
| Dere06g1424 | 520 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | P450 superfamily signature | 451 | 462 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | Gene3D | Cytochrome P450 | 43 | 513 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 104 | 125 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 195 | 213 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 80 | 99 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 | |
| Dere06g1424 | 520 | SUPERFAMILY | Cytochrome P450 | 50 | 508 | IPR036396 | GO:0004497|GO:0005506|GO:0016705|GO:0020037 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere06g1424 | Dere-ChrDere06 | 27107092 | 27110698 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere06g1424 | 24 | 505 | Cytochrome P450 | AT2G45550 | 39.113 | 7.10e-125 | 373 |