Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1419 ATGAACGCTTCGTATTTTCGGCTTTGTGCTAATGCTGCTGCAGATGGTTGTCTAATAAATGAACAATTAGGGTTTTCTAGGCGCGTCCAGTTACCGTCAGGCCTGGCTCTCGAGAGCTACTTAGACTCCGGTCACCAAGGGGCGGTGCCCCCAATGGCACCCTCTCGGGTGGCTGGAGGGTTGACTCAATCATCATCAAGTTCTGGAATATTCTTTCAAGGAGATGGGCAATCACAGAATGTTGCTAACTCTCACTTAAATTCATGTTTTGGTAATTCAACCAACTCAATTCCTGGAACTGGACGTTCAAATCTGGGTCCAATTTCTGGGGACATGAGTAATGCAATTCTTAACAGTGTGGCAAATTCAGGACCAAGTGTTGGGGCAAGTTCATTAGTCACAGATGCAAACTCTGCACTCTCAGGAGGCCCTCGTTTGCAGAGAAGTGCTAGCATTAACACAGACTCATACTTACGTTTACCTGCATCACCCATGTCATTCTCATCAAATAATATTAGTATTTCAGGGTCATCAGTTATGGATGGTTCTTCTGTAGTACAGCAGAGCTCTCATCAAGACCCGAATGTTCAACAATTGCAGCAGAATCAGCAGCAGCCACAGGGTACTTCTAGTGCAATGTCTTTGCCTGCATCTCAAACTGGCCCAGTGCCACTGCCAATGGGTGCACGAGTACCTGGATCTTTGATTCAAGATCCAAATAATCTATCCCAGTTGCAGAAGAAACCTCGGCTGGATATCAAGCAAGAAGATATAATGCATCAGCAGGTAATACAACAGTTTCTTCAGAGGCAGGACCCCATGCAGTTCCAGGGCCGTAATCCACACTTACAGGCTTTGCTTCAGCAGCAGAGACTGAAGCAACAGCAGCAACAAATTCTTCAATCAATGCCGCAGTTACAGAGAGCCCACTTGCAACAGCAGCAGCAACAACAACAAATGCAATTGAGGCAGCAAGTACAGCAACAAGTAATGCAGCCCCAATCTGCCATGAAGCGCCCATATGATAGTGGTGTATGTGCCCGTCGTCTGATGCAGTACCTATATCATCAAGGGCAGCGACCAAATGATAATAGTATTGCCTATTGGAGAAAATTTGTGGCTGAATATTACTCCCCTCGTGCAAGGAAAAGGTGGTGTTTGTCATTATATGATAATGTCGGCCAACATGCACTTGGTGTATTCCCCCAAGCAGCTATGGATGCATGGCAGTGCGACTTATGCGGTTCTAAATCTGGAAGGGGATTTGAGGCAACTTTTGAAGTTCTCCCTAGACTTAACGAAATCAAATTTTGCAGTGGAGTGATTGATGAACTTATGTTTTTGGACTTGCCACGGGAATATAGATTTCCTTCTGGTGTAATGATGTTAGAATATGGAAAAGCAGTTCAAGAGAGCATACACGAGCAACTTCGTGTTGTCCGTGAGGGTCAACTTCGCATCATATTCACACAAGACCTGAAGATTTTATCTTGGGAATTTTGTGCAAGGCGCCATGAAGAACTTCTTCCTCGAAGGTTGGTTGCACCCCAGGTAAGCCAATTGCTTCAGGTAGCTGAAAAGTGCCAGAGTTCTATTACTGAAAGTGGATCTGATGGGATTTCTCAGCAGGACTTGCAGACAAACAGCAATATGGTAATAACTGCTAGGCGTCAGCTGGGAAAGAGTTTAGAGTTACAGTCTCTAAATGACTTGGGTTTCTCAAAACGATATGTGAGATGTTTGCAGATATCTGAGGTTGTCAATAGCATGAAAGATCTGATGGATTTCTGCCGAGAGCATAAAGTTGGCGCAATTGAGGGATTGAAAAATTATCCTCGACATGCATCTGCGGCCAAGCTCCAGATGCAAAAGATGCAGGAGATGGAACAGCTAGCAAGTGTTCAAGGCCTGCCAACTGACCGAAACACACTTAACAAGCTAATGGCATTGCATCCTGGATTGAACAACCAAATCAACAATAATCCTAATCTTGTTAATCGCGGTGCTTTAAGTGGATCTGCACAAGCTGCATTGGCACTGACTAGCTACCAGAATGTTCTCATTAGGCAGAACTCTATGAATTCAAACCCTAACTCACTTCAGCGGGAAGCATCTTCTTCCTTCAATTCTTCAAACCAGAGTCCATCTTCACACTTAGGTGCTGCTGCTTTGATTCCAGGGTCTATGCAGAGTTTACCTGTCAGTGGTTTTTCAAGTCCCCATCTATCCCCACAGCAACAGCAGCAGCTGCAACAACTTAAACAGTGCTCATTAAGTGCAAATAGCTTATTGCAACAAAATCATCCACAGGGCTCCCAAGGAATTCAGGCTCTGCCTCCGCAGATGCTCCAGCAACTGGTTCATGAATTGTCCAATAACAGTGGGGGAGGAGTGCAACCCCAGTTCCTCCCCGGACCCGATGCCAATGGAACTATTGCAAAGAATGGGTTGGGTTTTGGAGGTAACGCTCCACCAGCAACTGGAGGTACTTCCAATGTTTCGGGAAGTAATGGACCTGCTCCTAGCAGGAGCAACAGCTTTAAAGCTGCTTCAAACAGTGATTCTTCTGCAGCTGGTGGCAACAACAATGGATTCAACCAAAGAACTACTGATATACCACAAAATCTCCACTTGCAAGATGTGGTTCAGGATATTGCCCACGAGTTCACCGATAATGGTTTCTTTGACACTGATCTCGATGATTATGCTTGGAAGGCATGA 2721 0.4524 MNASYFRLCANAAADGCLINEQLGFSRRVQLPSGLALESYLDSGHQGAVPPMAPSRVAGGLTQSSSSSGIFFQGDGQSQNVANSHLNSCFGNSTNSIPGTGRSNLGPISGDMSNAILNSVANSGPSVGASSLVTDANSALSGGPRLQRSASINTDSYLRLPASPMSFSSNNISISGSSVMDGSSVVQQSSHQDPNVQQLQQNQQQPQGTSSAMSLPASQTGPVPLPMGARVPGSLIQDPNNLSQLQKKPRLDIKQEDIMHQQVIQQFLQRQDPMQFQGRNPHLQALLQQQRLKQQQQQILQSMPQLQRAHLQQQQQQQQMQLRQQVQQQVMQPQSAMKRPYDSGVCARRLMQYLYHQGQRPNDNSIAYWRKFVAEYYSPRARKRWCLSLYDNVGQHALGVFPQAAMDAWQCDLCGSKSGRGFEATFEVLPRLNEIKFCSGVIDELMFLDLPREYRFPSGVMMLEYGKAVQESIHEQLRVVREGQLRIIFTQDLKILSWEFCARRHEELLPRRLVAPQVSQLLQVAEKCQSSITESGSDGISQQDLQTNSNMVITARRQLGKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLMDFCREHKVGAIEGLKNYPRHASAAKLQMQKMQEMEQLASVQGLPTDRNTLNKLMALHPGLNNQINNNPNLVNRGALSGSAQAALALTSYQNVLIRQNSMNSNPNSLQREASSSFNSSNQSPSSHLGAAALIPGSMQSLPVSGFSSPHLSPQQQQQLQQLKQCSLSANSLLQQNHPQGSQGIQALPPQMLQQLVHELSNNSGGGVQPQFLPGPDANGTIAKNGLGFGGNAPPATGGTSNVSGSNGPAPSRSNSFKAASNSDSSAAGGNNNGFNQRTTDIPQNLHLQDVVQDIAHEFTDNGFFDTDLDDYAWKA 906
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1419 906 MobiDBLite consensus disorder prediction 825 872 - -
Dere06g1419 906 MobiDBLite consensus disorder prediction 693 719 - -
Dere06g1419 906 Pfam LIM-domain binding protein 349 608 IPR029005 -
Dere06g1419 906 MobiDBLite consensus disorder prediction 178 242 - -
Dere06g1419 906 PANTHER LIM DOMAIN-BINDING PROTEIN 93 895 IPR029005 -
Dere06g1419 906 MobiDBLite consensus disorder prediction 693 720 - -
Dere06g1419 906 MobiDBLite consensus disorder prediction 178 218 - -
Dere06g1419 906 MobiDBLite consensus disorder prediction 791 872 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1419 Dere-ChrDere06 27045289 27051076 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1419 337 615 C2H2 Transcription Factor Family AT1G43850 57.348 8.69e-107 348