Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1414 ATGAATCAAAGTCGGTGTGCAGCTTGCAGGAGTCAGAGAAGAAAGTGCCCTTCTGATTGCATTTTCTTTCCCTATTTTCCTGCCAATGATCCTCAAAGATTTGCTTGTGTTCACAGAATATATGGTTGCCACAATGTTGCAAAAATGCTTCAGCAAATCCCACCGTATGTGAGAGCAGAAGCAGCAGATGCATTGTATTTTGAAGCACAACGTAGGATTGAAGACCCAGTGTACGGGTGTGTTAGGATTATTTCTCAGTTGCACCAAGAAATCCTCAATACAGAAATTGAGCTAGTAAGAATCCAAGCTCTTCTTGCTTTTCACAAGTTTGAAATTCCACAAGTTCATGTTCATCAACCAAGCTGGGATATCTTGCCATCACAAAGCAACACAGCCAACTTTCTGTTTGATTCTCCAGATCAACATCCTGGGTTCAATTAA 441 0.4104 MNQSRCAACRSQRRKCPSDCIFFPYFPANDPQRFACVHRIYGCHNVAKMLQQIPPYVRAEAADALYFEAQRRIEDPVYGCVRIISQLHQEILNTEIELVRIQALLAFHKFEIPQVHVHQPSWDILPSQSNTANFLFDSPDQHPGFN 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1414 146 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Dere06g1414 146 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 115 - -
Dere06g1414 146 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1414 Dere-ChrDere06 26953999 26954667 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1414 1 117 AS2 family AT3G26620 57.265 7.29e-47 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Dere06g1414 LOB 6.9e-35 No_clan