Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1413 ATGGCTGATTCTGAAAGTGATCTTGAGAGACTTGATATCACTGTGATGCTCGTGGACGATGATCCCAAGACTCTCTCCCTCGTCGCAGTTGCCACAGCTACCAGTGGCCATGAAGCTTTGGAGACTCTTAGAGAGCTTAGAGGCTTTTTTGACATCGTTGTCACTGACCTTTATATGCCAGGAATGAATGGCTTTGAACTGCAAAAGCATGTCAAACGAGAATTCCAGCTTCCCGTTGTCATTATGTCTGCAGACAGGAGGAAAAGAGTGATGTCCAGGACTTTAGCAAACGGTGCATCATTTTACATAGTGAAGCCAGTAAACCGAGACGACTTCAAAAACATATGGCAGTATGTTGTGGCTGCTAGGAAGGAAAAATTCCTCGTTGAGGGTGATGAGTTATTATTGTTGGAAGGAAGCCAAGAAGGAGAGTCATCACCTTGTGAGAAGAGCAAGAACATACCCTCTCAGAATGTTAATTCTGGTGAATCAGTAGGGACGTCAGGGACTAGGCCAAAGAGAAAGTATAACAAGAGAAAAGGTCCTCAATTGCAGAAGGACGATGTTGCAGGAAGCCCTGGGACTGCCAAGAAGCCTAAGATTGTTTGGACTACTTCACTTCACAATCGGTTCTTGCTGGCCATAAGACACATTGGAATGGACAGACTTCATGCGTCATTAAATGCCAAACATACTAAGTATCGCATATTTCTGAAGAAAGTTGCAGAGAAGGGAATAATTGAAGGATTATCTGAGAGAGCCTTAAGGTCAAGGTTTGCTGCTGGCCTTCCCACAGCTCTCGTCAGAGACATGCAAAAGAGAGCGATTCGTTTTCGCTATCATCATCATCATCATCATCGTCAACCTCCAACCCTTAACATCTCCAGGCCTAAACCTCTAACCACTGCTAGTAATATCTCTAGGCCTCAACCTCCACCTCCCCAGTTTCCCTATAATCCTTCACCAACCAGACCCTCTCTCCTCAATGAAATCAGACTTGGACAATCAAACCTCTTTGGGACAAATCCTAACTATCAAAATTTCCAGCAACCCCAATTATTCCATGGTCAGCCTAATCATCTTCTCAATCGTCCTACCTTGCCAGCTTATAATGGAAATGGAGGGTTAGTGACTTCTGCAAATGTTCTGAATGCGAATGGTCAAGTGATCAGTAATCATGCAGGTTCATTGGTAAATAACAGCAGCTTCAACTATGAATCCATCAATAATTGTAACAACAATAATTATGGGGGATGGATGCAAGTACCTTCTGGCAGCACTATCCTGCAACCATTTAGTTCTAGTACTAATTATAACTACTACGGGAATCTGAATAATAATGGATCTCTTATGGCTGCTGGGAGAAATCAAAGTCAGACTGCTGGTTATGTGGGAAGAAACAATAACATTAGCAACAACAGATTTGGCTTGATCAGTAATGGGAGTGCTTCAAACTATGCAAATACGGCTGTACCATCCTCAGTATTGAATGACTCTGTTGAATCAGCTCAAGAAAATATTTCAGGGCTTCCCCCTTTGCCCCACCAGTCAATTAATGGTATTGGGAATGCTGAAGGTCATAAGCATAATCAGTATGGCACTCCCAGTTCAATGACTGATATCGAGGCCTACCTATTCGATGAAAATCTTAATGAGCTTTTCCTCATGCTAGACGACATGGAACTTCTTGACAAGACGGACGAGAGTCCTCGAGCAAGTGAAATTTTGAATCGTGACATTTCTAGTCCCTTCAATGCTGAACAGTGCCTTGAGCAGTTTCAGGGAGTCGGTGATCAAGTAAATGCTCCCACAAATGGAAGCAGCATCAATGTACTGCCAAATCAGTCCCCAATTTGCACCACTGAAAACCCTAATCAGCTGTTGAGCGATGATATGTTTTCAAACTTGGAACCACTGGACATGTACATGGTAGACAATGCTAATTCTTCAGCAAGAAACTCAGCTCCACAAGAGCAGGCAAGCCATCTTCTATAA 1995 0.4316 MADSESDLERLDITVMLVDDDPKTLSLVAVATATSGHEALETLRELRGFFDIVVTDLYMPGMNGFELQKHVKREFQLPVVIMSADRRKRVMSRTLANGASFYIVKPVNRDDFKNIWQYVVAARKEKFLVEGDELLLLEGSQEGESSPCEKSKNIPSQNVNSGESVGTSGTRPKRKYNKRKGPQLQKDDVAGSPGTAKKPKIVWTTSLHNRFLLAIRHIGMDRLHASLNAKHTKYRIFLKKVAEKGIIEGLSERALRSRFAAGLPTALVRDMQKRAIRFRYHHHHHHRQPPTLNISRPKPLTTASNISRPQPPPPQFPYNPSPTRPSLLNEIRLGQSNLFGTNPNYQNFQQPQLFHGQPNHLLNRPTLPAYNGNGGLVTSANVLNANGQVISNHAGSLVNNSSFNYESINNCNNNNYGGWMQVPSGSTILQPFSSSTNYNYYGNLNNNGSLMAAGRNQSQTAGYVGRNNNISNNRFGLISNGSASNYANTAVPSSVLNDSVESAQENISGLPPLPHQSINGIGNAEGHKHNQYGTPSSMTDIEAYLFDENLNELFLMLDDMELLDKTDESPRASEILNRDISSPFNAEQCLEQFQGVGDQVNAPTNGSSINVLPNQSPICTTENPNQLLSDDMFSNLEPLDMYMVDNANSSARNSAPQEQASHLL 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1413 664 Gene3D - 13 153 - -
Dere06g1413 664 Pfam Response regulator receiver domain 29 114 IPR001789 GO:0000160
Dere06g1413 664 MobiDBLite consensus disorder prediction 306 321 - -
Dere06g1413 664 MobiDBLite consensus disorder prediction 281 322 - -
Dere06g1413 664 PANTHER TWO-COMPONENT RESPONSE REGULATOR 14 222 IPR045279 GO:0009736
Dere06g1413 664 CDD REC_typeB_ARR-like 15 120 - -
Dere06g1413 664 ProSiteProfiles Response regulatory domain profile. 1 120 IPR001789 GO:0000160
Dere06g1413 664 SUPERFAMILY CheY-like 13 121 IPR011006 -
Dere06g1413 664 MobiDBLite consensus disorder prediction 144 171 - -
Dere06g1413 664 SMART REC_2 13 116 IPR001789 GO:0000160
Dere06g1413 664 MobiDBLite consensus disorder prediction 140 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1413 Dere-ChrDere06 26946259 26952149 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1413 11 259 Response Regulator Gene Family AT5G07210 35.172 1.86e-36 143
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Dere06g1413 Response_reg 2.7e-17 CL0304