Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1408 ATGGATGTTGCTAAGAGCAACAGCAGCTCTGAACCTTCAACTTCTTACAGTTGTTACAGAGTTGCAAGTCTCACTGAAACCATACTGGACACAAAGCAGTCTGCAAATTTGAAAGATCGTTATGTTCTTGGTGAGCAGTTAGGTTGGGGACAATTTGGTGTTATTAGGGCGTGCACTGACAAGCTGACTGGAGAGGTTTTGGCCTGCAAATCAATTGCGAAAGATAGATTGGTTACTTCAGATGATCTGCGAAGTGTCAAACTAGAGATTGAGATAATGGCTAGGTTATCAGGGCACCCTAATGTTGTAGATCTCAAGGCAGTTTATGAAGAGGAGGATTTTGTTCATCTGGTGATGGAGCTTTGTGCTGGAGGTGAACTGTTTCACCGGCTGCAGAAGCATGGTCGATTTTCTGAATCTGAAGCTAGGGTTCTCTTCAGGCACCTCATGAAGGTGGTTCTGTATTGTCATGAAAATGGGGTTGTTCATAGAGATTTGAAGCCTGAGAACATTCTCTTAGCAACAAGAGCCTCCTCATCTCCAATTAAATTGGCAGATTTTGGGCTTGCAACCTACATCAAGCCTGGACAAAGTTTGCATGGGTTAGTAGGGAGTCCATTCTATATAGCTCCAGAGGTACTTGCAGGTTCATATAACCAGGCTGCTGATGTTTGGAGTGCAGGTGTCATTCTTTACATTCTACTTAGTGGGATGCCTCCGTTTTGGGGGAAGACCAAGTCACGGATATTTGAAGCTGTTAAGGCTGCTGACCTGAGGTTCCCTTCTGAACCTTGGGATCACATTTCTAAATCAGCTAAGGATTTGATTAAGGGAATGCTCTGCACAGAACCTTTTCGAAGGCTCACCGCTCAGCAGGTTTTAGATCATTGCTGGATGGAGAGCAATCAAACAAATCCTGAACAACTAAATGAACATAACGTCCAAAGTTGTGGGGAATCGGATGTTGGTGACAGCTCATTCTCTGCGTCCTTTATGACCAGGAGTCAGGACATCAGTTTTGGCGCGGAATCTCCTATATGTGATGCTCAGTCACCTACTTTCACATGCAGATCATCATTTTCTTCTTTTCTGGTGGAACCAGTGACTCCTTGTTCAGCTTTGGGTGGGTTTTCATTTCAGAGTCCTGGTGATTCTGCTGGTTTGGAATTCTTTTCACCTGTTCCTTCAATGCCTAGCTTTGCATTTCTCAGCCCTAATTCTGTTGTTGAGAAAAGGAGTTGTACATTAGAGTTCTCAACCACTGCATCAAGTGTAAAGACAATTGCCGAAGATGCAAGCTTGGGGAAACTACTACTACCAGATTCAACCCTTTGTTTTGGACAAGATGTTAAACTAATGAATCGTAAGCCAGTGGAGACTAAAAGGGCAGGTGGTACAAATGTACATAGGGTTTTGGGAATTCACAGCAAGAGAAACCGAACAATTGGACTTGGTGAAAGTGAGCAACTCGACCTCGTGGTGACTGAATCAGTCATTCGTTGGTCATCATGCACTCAACTCCCTACATCTCTTAGGTCATCCCTTGTCTGCTAA 1554 0.4395 MDVAKSNSSSEPSTSYSCYRVASLTETILDTKQSANLKDRYVLGEQLGWGQFGVIRACTDKLTGEVLACKSIAKDRLVTSDDLRSVKLEIEIMARLSGHPNVVDLKAVYEEEDFVHLVMELCAGGELFHRLQKHGRFSESEARVLFRHLMKVVLYCHENGVVHRDLKPENILLATRASSSPIKLADFGLATYIKPGQSLHGLVGSPFYIAPEVLAGSYNQAADVWSAGVILYILLSGMPPFWGKTKSRIFEAVKAADLRFPSEPWDHISKSAKDLIKGMLCTEPFRRLTAQQVLDHCWMESNQTNPEQLNEHNVQSCGESDVGDSSFSASFMTRSQDISFGAESPICDAQSPTFTCRSSFSSFLVEPVTPCSALGGFSFQSPGDSAGLEFFSPVPSMPSFAFLSPNSVVEKRSCTLEFSTTASSVKTIAEDASLGKLLLPDSTLCFGQDVKLMNRKPVETKRAGGTNVHRVLGIHSKRNRTIGLGESEQLDLVVTESVIRWSSCTQLPTSLRSSLVC 517
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1408 517 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 315 - -
Dere06g1408 517 ProSiteProfiles Protein kinase domain profile. 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1408 517 ProSitePatterns Serine/Threonine protein kinases active-site signature. 161 173 IPR008271 GO:0004672|GO:0006468
Dere06g1408 517 ProSitePatterns Protein kinases ATP-binding region signature. 47 74 IPR017441 GO:0005524
Dere06g1408 517 CDD STKc_CAMK 40 298 - -
Dere06g1408 517 FunFam Calcium-dependent protein kinase 1 43 126 - -
Dere06g1408 517 Gene3D Phosphorylase Kinase; domain 1 42 127 - -
Dere06g1408 517 SMART serkin_6 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1408 517 FunFam Phosphoenolpyruvate carboxylase kinase 128 315 - -
Dere06g1408 517 Gene3D Transferase(Phosphotransferase) domain 1 128 333 - -
Dere06g1408 517 Pfam Protein kinase domain 41 299 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1408 517 SUPERFAMILY Protein kinase-like (PK-like) 38 373 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Dere06g1408 Dere-ChrDere06 26849170 26851791 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1408 24 306 EF-hand Containing Proteins AT3G57530 49.117 1.98e-98 302
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Dere06g1408 Pkinase 3.8e-72 CL0016