Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1398 ATGGAAGTAAATCAGAAACGGGGAATCGAAGATAAAGGCGAGGATTTTAATGACGAAGAAGAAAGCCATAGTGCCGATATATCTCCATCTGAGACGACGTCAATGGCGGAGAGGGCGGAGTCAAAATTTCCGGAGCCAGTGCCGCCGTCACCGGCGGCGGCACCCTTGAAAGAAGAGTTGACGGACACGGAGCAAAGCCTGGACGAGTCTCTTCCCTTGGGTCTTATTCAGGTTCCGTTAACGAAGTCAACGCCAGTGAGAAAGGCGGCGGTGCCGGCGAAGAAACCTTCCAAGGACCGCCACACAAAGGTTGAGGGCCGTGGCCGGAGAATCCGAATGCCGGCGACTTGCGCGGCCAGAATCTTCCAGCTAACCCGAGAGCTAGGCCACAAGTCTGACGGAGAGACAATCCGGTGGCTACTCGAGCATGCCGAATCGGCAATAATAGAAGCCACAGGCACCGGAACCATCCCCGCTATCGCCGTCTCCGTCGGCGGCACTCTAAAGATCCCAACAACCTCCCCGGCCAGACCAGGCGGAGAAGAAACTCCAAGAAAACGGAGACGGCGGGCATCAAACAGTGACTTCATCGACGTGAACGATCCAATCTCAATCTCTTCAGGGCTAGCTCCGGTAGCTCCAATGTCATACGGGGCTGTTGCTGCTGCCGGCGGGGGTGGAGGTGGCGCTTCGGGAGGACTAGTGCCTCTGTGGCCGGTGGGTGGGTCAAACGCATCAGGTCCGTTCTTGATGTTTCCAAATACTGGTGGTTCTGCAAATCAGCCACAATACTGGGCGATTCCGGCGAGTGCGACGCCGTTCTTCAATGTTCAAGCGCGACCCATTTCGAACTTCGTCTCTACGATGATGCAACCCAGCGAGCAACTAGGACCTTCTTCAGGTTCCATGAACACTTCAAATTGTGCTTCTGCTTCAAGTTCTGCGAACTCTTCGTCGACGATGGCTCCTAGTTTGAGCTCGGGAACGAGTCCTAGTGTTAGCGCGGCTACTACTACGGCGACGACGACAGCGACTCAGATGCTTAGGGATTTCTCTTTGGAAATTTACGACAAGAAAGAACTGCAATTTTTGGGTCGGTCTGCGAATTCTGAACCGCCGAGTTCAAAGCCTTGA 1134 0.5459 MEVNQKRGIEDKGEDFNDEEESHSADISPSETTSMAERAESKFPEPVPPSPAAAPLKEELTDTEQSLDESLPLGLIQVPLTKSTPVRKAAVPAKKPSKDRHTKVEGRGRRIRMPATCAARIFQLTRELGHKSDGETIRWLLEHAESAIIEATGTGTIPAIAVSVGGTLKIPTTSPARPGGEETPRKRRRRASNSDFIDVNDPISISSGLAPVAPMSYGAVAAAGGGGGGASGGLVPLWPVGGSNASGPFLMFPNTGGSANQPQYWAIPASATPFFNVQARPISNFVSTMMQPSEQLGPSSGSMNTSNCASASSSANSSSTMAPSLSSGTSPSVSAATTTATTTATQMLRDFSLEIYDKKELQFLGRSANSEPPSSKP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1398 377 MobiDBLite consensus disorder prediction 1 26 - -
Dere06g1398 377 MobiDBLite consensus disorder prediction 1 68 - -
Dere06g1398 377 ProSiteProfiles TCP domain profile. 97 151 IPR017887 -
Dere06g1398 377 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 41 359 IPR005333 GO:0003700
Dere06g1398 377 Pfam TCP family transcription factor 97 163 IPR017887 -
Dere06g1398 377 MobiDBLite consensus disorder prediction 180 195 - -
Dere06g1398 377 MobiDBLite consensus disorder prediction 86 107 - -
Dere06g1398 377 MobiDBLite consensus disorder prediction 291 339 - -
Dere06g1398 377 MobiDBLite consensus disorder prediction 170 197 - -
Dere06g1398 377 MobiDBLite consensus disorder prediction 92 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1398 Dere-ChrDere06 26761169 26762302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1398 85 364 TCP Transcription Factor Family AT5G51910 51.042 9.80e-78 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere06g1398 TCP 7.1e-28 No_clan