Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1397 ATGACGCTATTTTCAGCAAGCAAAGCGGAGCTTGATGCCCACTACTATGGTCAAACTTGTCGAGAATTGGAGAAAATAATAAGGGACACCGTTCTCGATGCTTCGAAGCATGACCCCAAAGTCCCTCCTCGTATCTTGAGGATGTTCTTCCATGACTGTTTCATAAGGGGATGTGATGCATCAGTGTTGCTGGAGTCCAGTCGTGAAAAACAAGCAGAGAAAGATGGGCCTCCAAATAAATCACTTGGAGCATTCTATGTGATCGATGATGTGAAAGCCAAGCTAGAAAAAGCATGCCCTCGCACTGTTTCCTGTGTTGATATACTTGCCATTGCAGCAAGAGATGTCGTAGCCATGTCTGGAGAGTTTGCACATGACCTTAGAGGAAAATGTCCAAAACCAAATAAGGATAACAATGCTGGACAGTTGTTGGACACAACAGCTTCGGTGTTTGACAATGACTACTTTAAACGAGTAATTGGAGGGAAAGGTGTGCTTCTTTCGGATCAAACACTTGTTGGTGATTATAGGACAAGATGGATTGTTGAAGCATTTGCTCAAGACCAAGGCTTGTTCTTCGGAGAATTTGTTGATTCCATGTTGAAACTTGGGAATCTTGGGGTGTCTGGGAATAATGGAGAAGTGAGACTAAACTGTAGGGTTGTAAATTGA 672 0.4315 MTLFSASKAELDAHYYGQTCRELEKIIRDTVLDASKHDPKVPPRILRMFFHDCFIRGCDASVLLESSREKQAEKDGPPNKSLGAFYVIDDVKAKLEKACPRTVSCVDILAIAARDVVAMSGEFAHDLRGKCPKPNKDNNAGQLLDTTASVFDNDYFKRVIGGKGVLLSDQTLVGDYRTRWIVEAFAQDQGLFFGEFVDSMLKLGNLGVSGNNGEVRLNCRVVN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1397 223 PANTHER - 119 223 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 ProSiteProfiles Plant heme peroxidase family profile. 10 223 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Haem peroxidase superfamily signature 103 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Haem peroxidase superfamily signature 144 159 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Haem peroxidase superfamily signature 42 56 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 Gene3D Peroxidase, domain 2 123 203 - -
Dere06g1397 223 Gene3D - 14 122 - -
Dere06g1397 223 Pfam Peroxidase 28 121 IPR002016 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 SUPERFAMILY Heme-dependent peroxidases 11 223 IPR010255 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Plant peroxidase signature 102 112 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Plant peroxidase signature 20 39 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Plant peroxidase signature 83 96 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 PRINTS Plant peroxidase signature 44 64 IPR000823 GO:0004601|GO:0006979|GO:0020037
Dere06g1397 223 Gene3D - 204 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1397 Dere-ChrDere06 26745744 26747543 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1397 118 223 Peroxidase AT5G51890 57.009 1.88e-35 126