LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere06g1389	ATGTCTCTCTTCTCTTTCTCACATCGCACCCTCTTCTGGGGAACAACACTCGCTTTCTTTTTGAACTCTCTCCATTACATCGCAAATTCCACCTCAACCCAGACACCTTGCTCTAAAATGGACGCCTACCACAAGCTCAACGTCGTCCTCAACCCAAACGGCACTCTTGCGCGCTTAAACCACCCTTCCGTGAGCCCTCCCTCACCCGATCCCGACCTCCCCATCCCTGTTCTCTCCAAAGACCTCGCCATTAACCCTTCCAATCACACTTGGCTTCGCATTTTCCTACCCCGCAAAGCACTGGATCATACCCTCTCCTCCGACAAGAAGCTACCTTTTATCGTTTTCTTCCACGGTGGCGGCTTCATCGTACTCAGCGCAGGCTCCACAATGTTCCACGAATTCTGCCTCAACATGGCCGACGACCTCGGCGCCGTCGTCGCCTCCGTTGAGTACCGCCTCGCTCCGGAGCATCGCTTGCCGGCGGCGTACGACGACGCCGTGGAGGCCCTGCACTGGATCAAAACCCAACCTGACCGGTGGTTGACACAGTACGCTGATTATACAGAATGTTATCTAATGGGAAGTAGTGCAGGGGGAAACATCGCGTACCACGCGGGTCTACGTGCGGCTTCGGAGGTTGATCAACTTCAACCGTTGAAGATTACAGGGCTAATATTGGTTCAGCCATTTTTTGGTGGGACCCAGAGGAGTGGGTCAGAACTGAGGCTGGTCAACGACCCGAAGTTGCCACTTTGTGTGACTGATCTACTGTGGGAACTGTCGTTGCCCGTTGGAGTTGACCGTGACCATGAGTATTGCAATCCGACGGCTGGAGATGGTCCAGAGAAATTAGAGAAGATCAGACGGCTGGGATGGCGAGTGTTGGTGACTGGGTGTGGAGGGGACCCACTGGTGGACAGACAGATGGAGGTGGCGAAGATGATGGAGGAGAGAAATGTGAAAGTGGTGGGCCACTTCACCGAGGGAGACTCTCATGGGATTCAGGATCGTGATCCCTTGAAAGCTAAGGAGCTCTATGGGGTAGTGAAGAAGTTTTTAAACGTCGTCGTTTCCGAGTATGTTGTGTATAGTACTGATTGA	1104	0.5326	MSLFSFSHRTLFWGTTLAFFLNSLHYIANSTSTQTPCSKMDAYHKLNVVLNPNGTLARLNHPSVSPPSPDPDLPIPVLSKDLAINPSNHTWLRIFLPRKALDHTLSSDKKLPFIVFFHGGGFIVLSAGSTMFHEFCLNMADDLGAVVASVEYRLAPEHRLPAAYDDAVEALHWIKTQPDRWLTQYADYTECYLMGSSAGGNIAYHAGLRAASEVDQLQPLKITGLILVQPFFGGTQRSGSELRLVNDPKLPLCVTDLLWELSLPVGVDRDHEYCNPTAGDGPEKLEKIRRLGWRVLVTGCGGDPLVDRQMEVAKMMEERNVKVVGHFTEGDSHGIQDRDPLKAKELYGVVKKFLNVVVSEYVVYSTD	367

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere06g1389	367	SUPERFAMILY	alpha/beta-Hydrolases	49	354	IPR029058	-
	Dere06g1389	367	Pfam	alpha/beta hydrolase fold	114	335	IPR013094	GO:0016787
	Dere06g1389	367	PANTHER	ARYLACETAMIDE DEACETYLASE	48	333	-	-
	Dere06g1389	367	ProSitePatterns	Lipolytic enzymes "G-D-X-G" family, putative histidine active site.	114	130	IPR002168	GO:0016787
	Dere06g1389	367	Gene3D	alpha/beta hydrolase	43	362	IPR029058	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere06g1389	Dere-ChrDere06	26619540	26620643	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere06g1389	67	326	Carbohydrate Esterase	AT1G68620	40.149	2.00e-50	170