Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1387 ATGATGAACCCTTTGCGCCCACTTGGCGATGAAGATTTGTTCTTCCAGATTTCGTTTCTGAATTCTCCTTCTCTCTCTATCCAAACGATCCCAGAAGATCAGATCTTGCATGATCCTGCAGTAGTGAAGGATTATGAAACCTATCTTCCTAATTATAAGAGCGAAGTAATAGGAAAGGGCAAGGGCAAGCAGCAGCAGAAGCAAAATCCTGCTAAAATTGTTCAAGATGGAAGCAGGAAGTGGATACATAGGGAGACAGAAAGACAAAGGAGACAAGAAATGGCCAACCTTTGTGCCTCCATCAGATCGCTTCTGCCTCTTGAATATATCAAGGGAAAGCGATCAGCATCTGATCACATGCATGGGGCTGTGAATTATATCAAACACCTAAAGAATAGGGATGATATGGCTGAGAGTACTATCGACAACTCTGAACTGCAAAGAAAGCTTACTGAAGCAATATTTTCTACAGAACATAAGTAA 483 0.4161 MMNPLRPLGDEDLFFQISFLNSPSLSIQTIPEDQILHDPAVVKDYETYLPNYKSEVIGKGKGKQQQKQNPAKIVQDGSRKWIHRETERQRRQEMANLCASIRSLLPLEYIKGKRSASDHMHGAVNYIKHLKNRDDMAESTIDNSELQRKLTEAIFSTEHK 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1387 160 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 70 134 - -
Dere06g1387 160 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 78 130 IPR011598 GO:0046983
Dere06g1387 160 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 77 143 IPR036638 GO:0046983
Dere06g1387 160 Pfam Helix-loop-helix DNA-binding domain 82 131 IPR011598 GO:0046983
Dere06g1387 160 Gene3D - 74 157 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1387 Dere-ChrDere06 26591752 26592743 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1387 80 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 70.370 1.99e-20 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere06g1387 HLH 1.6e-08 No_clan