Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1385 ATGATTCACAACAACAAACAGCCAAAGAGCCGGCGGCAGAAGCCACCTGCTTTGCATGAAGATTACGACGATGTTCATAAGAAGCTGATGCGTAGGTACACAGAAAAACAAAGGAGGCAAGAGATGGCCAATCTTTCTGCTTCTCTTAGATCCTTACTCCCTCTTGAATACATCAAGGGGAAGCGGTCGATATCAGATCACTTCAATGAGGCTGCAAAATATATTAAACACCTACAGAATAGTATCAAGGAATTGGGTGGCAAGAGGGACAATCTAAGGATGATGACTAATTTAGGTGTTGGTGACCCAGAAATTGCAACCTTAGCAAAAGCTAGAACTCATGACCCACCAACGAGTGTTACTGCAAGACAATGGATGGGTGGGGTTGAGATTGTTCTCGGCACAGCACAAATGTTGCCTCTGTCAAGAGTACTGGACATACTACTCAAAGAGGGGTTAACTGTTGTTAATTGCGTTTATACAAAAGTAGAAGGAAGTCAGATATACACCATCCATACGGAGAATTCTGATCTGATCGGCATCGAACTCTCTGCACTGCAAAGGAAACTAGGAGAAGCAATTCCATCTTCAAGTAACTCTTCTCTCTGA 609 0.4319 MIHNNKQPKSRRQKPPALHEDYDDVHKKLMRRYTEKQRRQEMANLSASLRSLLPLEYIKGKRSISDHFNEAAKYIKHLQNSIKELGGKRDNLRMMTNLGVGDPEIATLAKARTHDPPTSVTARQWMGGVEIVLGTAQMLPLSRVLDILLKEGLTVVNCVYTKVEGSQIYTIHTENSDLIGIELSALQRKLGEAIPSSSNSSL 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1385 202 MobiDBLite consensus disorder prediction 1 21 - -
Dere06g1385 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 26 78 IPR011598 GO:0046983
Dere06g1385 202 Pfam Helix-loop-helix DNA-binding domain 28 79 IPR011598 GO:0046983
Dere06g1385 202 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 15 190 - -
Dere06g1385 202 Gene3D - 19 99 IPR036638 GO:0046983
Dere06g1385 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 27 95 IPR036638 GO:0046983
Dere06g1385 202 CDD bHLH_AtORG2_like 27 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1385 Dere-ChrDere06 26575368 26576446 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1385 27 190 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51780 43.678 2.67e-34 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere06g1385 HLH 1.2e-06 No_clan