Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1384 ATGTTTCCTTCACAACGAGGCAACGAGATGGTGATCCAATTTTCTAGCTGTCCCCACCTCCACCAACAGCAAAAGATCTCAGAAGATCTTATTCTGGATGGCCATGCTCATAGTCATACTCATGCTTCTCTGGATATAATCAATTTTTCTGATAAAAAATTACAAGGTAGCACCAGCACCAATCGGCCGAGGAAACTACTTCCTGAATCTTCTGATGATAAAATTAATCATCGTCGAAGTTCTAATAACGAGTACAAGAAGAAGAACGAGAAGATTATTCACAGGGAGATTGAGAGGCAAAGAAGGCAAGAAATGGCTACCCTTTATGCCTCTCTTAGATCTCATCTCCCTCTTGAGTTCGTCAAGGGAAGGCGATCCATATCAGATCACATGAATGAGGCGGTTAATTACATAAAGCATCTAGAAAAGAAAATCAAAGAACTGAGCGCTAAGAGAGATGAACTGAGGAGACTCTCAAGTAATTCTTCAAATCCAGAAACCCACGCGTGCGAAAATTACACATCTAGCAGCTATTTTAGTGTCCACGAGAACAATAATGATGGTGGCGTGGGAATTCAAGTTTCTAGTGGCTTCAAAGAGGAAAAGCTTCCCCTTTCAAAATTGCTTCAATTAGTGCTTGAAGACGAAGGACTTGGAGTTGCTACTTGTTTTTCCACGCAAATCAATGGAAGATTAATTCACAGCGTTCAGTGCGAGGTTAACAAGTCTGACCGCGTAGACGTACCTGCGCTGAGAAGGAAAATTGCCAATGCAGTTCCATCTTTTAGAAGTGCTGATTAA 801 0.4145 MFPSQRGNEMVIQFSSCPHLHQQQKISEDLILDGHAHSHTHASLDIINFSDKKLQGSTSTNRPRKLLPESSDDKINHRRSSNNEYKKKNEKIIHREIERQRRQEMATLYASLRSHLPLEFVKGRRSISDHMNEAVNYIKHLEKKIKELSAKRDELRRLSSNSSNPETHACENYTSSSYFSVHENNNDGGVGIQVSSGFKEEKLPLSKLLQLVLEDEGLGVATCFSTQINGRLIHSVQCEVNKSDRVDVPALRRKIANAVPSFRSAD 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1384 266 MobiDBLite consensus disorder prediction 54 88 - -
Dere06g1384 266 Gene3D - 79 170 IPR036638 GO:0046983
Dere06g1384 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 89 141 IPR011598 GO:0046983
Dere06g1384 266 Coils Coil 131 161 - -
Dere06g1384 266 MobiDBLite consensus disorder prediction 66 88 - -
Dere06g1384 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 87 157 IPR036638 GO:0046983
Dere06g1384 266 SMART finulus 95 147 IPR011598 GO:0046983
Dere06g1384 266 FunFam Transcription factor bHLH126 81 169 - -
Dere06g1384 266 Pfam Helix-loop-helix DNA-binding domain 93 142 IPR011598 GO:0046983
Dere06g1384 266 CDD bHLH_AtORG2_like 90 166 - -
Dere06g1384 266 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 81 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1384 Dere-ChrDere06 26567212 26568479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1384 94 256 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G25410 46.108 3.34e-42 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere06g1384 HLH 7.2e-10 No_clan