Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1383 ATGCCATCTCGGCGACAACTCCCCACCTCGCATCCGTCTACGGTGGTCGCCGTCGACCCGTACCCACCTTGCTCGATCTTCCTTCTCGCTTTCCTCTGTTTTCGCAGACACGCCAGAAAACGTACCACCCCTTCTTCCGATGCCGAGTCCAAGCCTCCTATTCGCATCTCCTACTCCCTCCTCCGTCGCGCCACGACGTCCTTCTCGACCCGTATCGGCCACGGCGGCTTCGGACCTGTCTTCTCCGGGACTCTGCATCCAACCCGTAAACCCATCGCCGTCAAGCTCATGGACTCTGCTTCTCTCCAAGGCGAGCGCGAGTTTCACAACGAGCTCTTCTTCGCTTCCAGGCTTCGTTCCCAACACGTCGTCGTTGCGATAGGCTTCGCCTCCGACAAAAATCGCCGGAGGTTCGTGCTCGTTTACGAGTTAATGCCCAATGGTAATCTTCAGGACGCGCTACTGCGGCGGAAGTGCCCTGAGCTGATGAATTGGAAGAAACGTTTCGCCATTATCGTTGATATAGCTAAAGGAATTCGTTACCTTCACTCTTGCGACCCACCCGTGATTCACGGAGATATCAAGCCAAGTAATATTTTATTGGACGCTTCTTTCTCCGCAAAAATTGGGGATTACGGACTTGCTCGGCTGAAATCGGAATCCCCGTACGAGGATGAGATTTTCCGTAATGGTGCGATTGGAATTGATGATTGTGGGTCAGTGGTTGAGGAAACCGAAAGTGTAAATATTGGTTTTGAAGAGCAATCAGCACCCATATTAGAAACATCGCCGGAGACAGATTTTCCAGCAGAGCCATCACCGTCGGAGGTGAATTCCGTCAAGGCTAAGAAGAACGGTGAAGGGTTAAAGAGCAGGTCAATGAAAGATTGGTGGAGGAAGCAAGATGATGAGAAGAAGAAGAGCAGGAAGCAATTGGAATGGTGGAGAGAGGAGTATTGTGATAAGCTGGCAAAGAAGAACAAGAAAAAGGGATTATACAGTGAAGAAGAAGCATTTGATGTAGAGAAAAAGAAGAGCAAAAGGCGTAGTAGTAGTATAGACTGGTGGTTCGATGGGGTTAGCAGGAACAGCCATGATTCTTTAAGCGGAGAAATTCACATTCCTAAGAGTGGTGGTGGAATCACTAGTACCCCAAGCATGAGAGGTACGGTTTGTTACGTAGCTCCAGAGTACAACTATGGCGGAGAAATAACAGAGAAGTGCGATGTGTATGGTTTTGGGGTTCTATTGCTTGTGATAGTTTCGGGGAGACGCCCAATAGAGGTGGGGAGTGGTTCGCCATTGTCAGAGATTCAGAGAGGGAATCTAGTGTCTTGGGCACGCCATTGCGCGCGAAATGGGAAGCTTCTAGAACTGGTAGATCAGTGTATGTGTATGAAGCTGTTGGAGAAAGAGGAGGTTCGTCTCTGCATCAAGGTGGCTCTGCTTTGTGTGGTAAAGTCACCTTCTCGTCGCCCTTCAATGGAGGAAGTTGTGGGAATGCTGTGTGGGGAGATAGAGCCCCCACAATTACCGCTTGAATATTCATTTCCATCACCATCTCTATTTTCTCTCAAGTCTCGGAAATACCCTCAGTGA 1599 0.4953 MPSRRQLPTSHPSTVVAVDPYPPCSIFLLAFLCFRRHARKRTTPSSDAESKPPIRISYSLLRRATTSFSTRIGHGGFGPVFSGTLHPTRKPIAVKLMDSASLQGEREFHNELFFASRLRSQHVVVAIGFASDKNRRRFVLVYELMPNGNLQDALLRRKCPELMNWKKRFAIIVDIAKGIRYLHSCDPPVIHGDIKPSNILLDASFSAKIGDYGLARLKSESPYEDEIFRNGAIGIDDCGSVVEETESVNIGFEEQSAPILETSPETDFPAEPSPSEVNSVKAKKNGEGLKSRSMKDWWRKQDDEKKKSRKQLEWWREEYCDKLAKKNKKKGLYSEEEAFDVEKKKSKRRSSSIDWWFDGVSRNSHDSLSGEIHIPKSGGGITSTPSMRGTVCYVAPEYNYGGEITEKCDVYGFGVLLLVIVSGRRPIEVGSGSPLSEIQRGNLVSWARHCARNGKLLELVDQCMCMKLLEKEEVRLCIKVALLCVVKSPSRRPSMEEVVGMLCGEIEPPQLPLEYSFPSPSLFSLKSRKYPQ 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1383 532 PANTHER OS07G0586332 PROTEIN 25 303 IPR044576 -
Dere06g1383 532 SUPERFAMILY Protein kinase-like (PK-like) 52 520 IPR011009 -
Dere06g1383 532 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Dere06g1383 532 Gene3D Transferase(Phosphotransferase) domain 1 51 234 - -
Dere06g1383 532 MobiDBLite consensus disorder prediction 283 302 - -
Dere06g1383 532 ProSiteProfiles Protein kinase domain profile. 66 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1383 532 Gene3D Transferase(Phosphotransferase) domain 1 359 508 - -
Dere06g1383 532 Pfam Protein tyrosine and serine/threonine kinase 386 499 IPR001245 GO:0004672|GO:0006468
Dere06g1383 532 Pfam Protein tyrosine and serine/threonine kinase 68 222 IPR001245 GO:0004672|GO:0006468
Dere06g1383 532 SMART serkin_6 66 502 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere06g1383 532 MobiDBLite consensus disorder prediction 262 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1383 Dere-ChrDere06 26543843 26545441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1383 376 502 Receptor kinase-like Gene Family AT3G58690 35.156 2.74e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XI Dere06g1383 PK_Tyr_Ser-Thr 2.4e-26 CL0016