Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1356 ATGGACATCTTGAACACAATTTTCATTCCCACAGCATTTTCCTTCTGTTTCTCCTCCTCGTTCTCTCTTGTTTCGTCCTCTGAAATTGCCAAAACCCATCAAAATTTCCGTCTCGTTGCTCCAGGGCACAGTGAATTGTACGCTACAGATACGAGGAATATCGAGCACGTGCTGAAAACACAGTTCGATAATTACAATAATGGCCAGTATAACCAAGAAATTACTAGCGATCTTTTTGGAAGGGCGATTTTCACGGTCGATGGTGACAAGTCGAGCATTGACCGTGACCTTGAGATTGCACCTGCTGTTCCTATGGATGGGAGGACGGCTGAAAGGGATGACGTTCTTCCTGATGATTATGGGGTCAAGAAGGGAGATATAGTATTTTATATGCCCTATGCTATGGGTAAAATGTCTTACATCTGGGGAGATGATGCTAGGGAATTTCAACCAGAAAGGTGGCTTAAAGATGGAGTTTTTCAACCCAAATCTCCATTCAAATTCATAGCTTCCAATGTAGGGCCTCGTATCTGCTTAGGGAAGCACTTTGCTTATAGACAGATGAAAATATTATCAATGGCTCTTCTTCGCTTCTACCGGTTTAAATTGGCAAATGGAACAAAAAATGTAACTTACAGAATTATGTTTACACTTAACATAGACAAGGGTCTTCCTCTCTGTGCAGTTCCAAGTGGTACTGAAATTTGGTATGTGAGAGAAGAGAAGATGCAGCCTTTCAAAGTTAAGAATTTGGGAATGGGAGATAAAGAAACAACTGGAAAGGCAAACGCAGTATCTGGAATAGCCGTCAGTGATGAATGTAAACTCAAGTTCCAAGAGCTAAAAGCCAAGAGGAACTATCGTTTCATTGTGTTCAAAATTGAGAATCAAGAAGTGGTGGTGGATAAAGCTGGAAGCCCAGATGCAACCTATGACGATTTTACTAAGTCTCTTCCTTCTAATGAATGCCGCTATGCTATCTTCGACTTTGATTTCATCACTGTTGAGAACTGTCAGAAAAGCAAGATCTTCTTCATCGCATGGTCTCCAGATACATCGAATGTGAGACAAAAAATGGTGTATGCCAGCTCCAAAGACAGATTCAAGAGAGAACTCGATGGCATTCAATATGAACTGCAAGCAACTGATCCAAGCGAAATGAGCTTTGACATCATAAAATCAAGAGCATATTAA 1194 0.4087 MDILNTIFIPTAFSFCFSSSFSLVSSSEIAKTHQNFRLVAPGHSELYATDTRNIEHVLKTQFDNYNNGQYNQEITSDLFGRAIFTVDGDKSSIDRDLEIAPAVPMDGRTAERDDVLPDDYGVKKGDIVFYMPYAMGKMSYIWGDDAREFQPERWLKDGVFQPKSPFKFIASNVGPRICLGKHFAYRQMKILSMALLRFYRFKLANGTKNVTYRIMFTLNIDKGLPLCAVPSGTEIWYVREEKMQPFKVKNLGMGDKETTGKANAVSGIAVSDECKLKFQELKAKRNYRFIVFKIENQEVVVDKAGSPDATYDDFTKSLPSNECRYAIFDFDFITVENCQKSKIFFIAWSPDTSNVRQKMVYASSKDRFKRELDGIQYELQATDPSEMSFDIIKSRAY 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1356 397 SMART adf_2 272 397 IPR002108 GO:0003779
Dere06g1356 397 Pfam Cofilin/tropomyosin-type actin-binding protein 274 394 IPR002108 GO:0003779
Dere06g1356 397 SUPERFAMILY Actin depolymerizing proteins 259 395 - -
Dere06g1356 397 Gene3D Cytochrome P450 97 223 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1356 397 Pfam Cytochrome P450 100 210 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1356 397 PANTHER COFILIN-RELATED 262 396 IPR017904 GO:0015629|GO:0030042
Dere06g1356 397 CDD ADF_cofilin_like 266 396 IPR017904 GO:0015629|GO:0030042
Dere06g1356 397 ProSiteProfiles ADF-H domain profile. 267 397 IPR002108 GO:0003779
Dere06g1356 397 FunFam Actin-depolymerizing factor 2 261 397 - -
Dere06g1356 397 SUPERFAMILY Cytochrome P450 100 230 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Dere06g1356 397 Gene3D Severin 257 397 IPR029006 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1356 Dere-ChrDere06 26104149 26112309 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1356 11 97 Cytochrome P450 AT2G45510 42.529 3.43e-16 78.2