Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1353 ATGGACGGTCCAACACTTACCGGATTGCTGAATCGAATCTCCAGCGAATTCCCCTTCCGTCCAGCCATCTCCGTCTCCGGTAAGTTTGATCTCACGTACGCTCGCCTTCTCGGACTGATCGAAGTCGCCGCTTCTCGTTTAGTCTCCTCTGGAATCAACCCCGGCGATGTCGTTGCTCTTACCTTCCCCAACACCGTCGAGTTCGTCATAATGTTTCTGGCCGTAATTCGAGCGCGAGCCACGGCTGCACCGCTGAACCCAGCCTATACAGCCGAGGAGTTCGAATTTTACTTATCCGACTCGGAGTCGAAGCTCTTATTGACGTCCCAGGAAGGAAACATTCCGGCTCAAGCCGCGGCTTCGAAGCTTAACATCTCTCACGCAACGGTTTCACTTTCCAAAGCCGATGACGACGAGCTCAATCTCTCGCTGACTCGGTCCGAGTCGCATGCCAACTCAGTAGCCGAACTCATTAACGACCCCTCCGACGTGGCCCTATTCCTCCACACCTCCGGCACCACAAGCCGGCCCAAAGGAGTGCCTCTGACTCAGCAAAACTTAGCCGCTTCGGTTCAGAACATCAAATCCGTGTACAAACTCACCGAGTCCGACTCAACGTTGATCGTTCTGCCACTGTTTCACGTCCACGGACTCATCGCAGGCTTACTGAGTTCACTCGGAGCCGGCGCGGCTGTAGCTCTGCCGGCTGCCGGTCGTTTCTCGGCTTCAACGTTTTGGCAAGATATGCTGAATCACAACGCCACATGGTATACGGCGGTCCCTACTATACACCAGATCATACTGGATCGTCACTCGAGCAAACCCGAACCCGACTACCGGAATCTCCGGTTCATCCGTAGTTGTAGCGCGTCGCTCGCACCGACTATATTAAGTCGGCTTGAGGAAGCATTCGGGGCTCCGGTTTTGGAGGCGTATGCAATGACCGAGGCGACGCATCTGATGTCGTCGAACCCGTTGCCGGAGGACGGACCACACAAGCCCGGGTCGGTCGGAAAACCCGTGGGCCAGGAAATGGCGATACTGAATGAGAAGGGAGAGATCCAGAAGGCTGAAATGCAAGGAGAGGTTTGCATAAGGGGTCCGAATGTGACAAAAGGGTACAAGAATAACCCGGAAGCTAATACGACAGCGTTTCAGTTTGGATGGTTTCATACCGGTGATCTTGGGTATTTTGATTCGGATGGATACTTGCATCTCGTGGGACGAATCAAGGAGCTCATAAATCGTGGAGGGGAGAAAATATCACCGATTGAAGTGGATGCAGTTCTGTTATCTCATCCAGATATTGCTCAGGCAGTCGCTTTCGGAGTCCCTGACGGCAAATATGGCGAAGAGATAAACTGTGCAATAATATCAAGAGAAGGATCAAAAATTGACGAGGAAGAGGTGATAAGATTTAGCAGGAAGAATCTTGCATCCTTTAAAGTCCCCAAAAAGGTGTTCCTCACTGATTCTTTACCAAAGACTGCCACAGGCAAGATCCTACGTCGCCTTGTAGCTGAACACTTCGTTTCTCAAAAATGA 1545 0.5191 MDGPTLTGLLNRISSEFPFRPAISVSGKFDLTYARLLGLIEVAASRLVSSGINPGDVVALTFPNTVEFVIMFLAVIRARATAAPLNPAYTAEEFEFYLSDSESKLLLTSQEGNIPAQAAASKLNISHATVSLSKADDDELNLSLTRSESHANSVAELINDPSDVALFLHTSGTTSRPKGVPLTQQNLAASVQNIKSVYKLTESDSTLIVLPLFHVHGLIAGLLSSLGAGAAVALPAAGRFSASTFWQDMLNHNATWYTAVPTIHQIILDRHSSKPEPDYRNLRFIRSCSASLAPTILSRLEEAFGAPVLEAYAMTEATHLMSSNPLPEDGPHKPGSVGKPVGQEMAILNEKGEIQKAEMQGEVCIRGPNVTKGYKNNPEANTTAFQFGWFHTGDLGYFDSDGYLHLVGRIKELINRGGEKISPIEVDAVLLSHPDIAQAVAFGVPDGKYGEEINCAIISREGSKIDEEEVIRFSRKNLASFKVPKKVFLTDSLPKTATGKILRRLVAEHFVSQK 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1353 514 CDD FACL_fum10p_like 18 508 IPR045310 GO:0016874
Dere06g1353 514 SUPERFAMILY Acetyl-CoA synthetase-like 5 511 - -
Dere06g1353 514 Gene3D - 5 409 IPR042099 -
Dere06g1353 514 Pfam AMP-binding enzyme 16 416 IPR000873 -
Dere06g1353 514 FunFam 4-coumarate--CoA ligase 2 412 513 - -
Dere06g1353 514 PANTHER ACYL-COA SYNTHETASE 13 512 - -
Dere06g1353 514 FunFam Peroxisomal-coenzyme A synthetase 5 409 - -
Dere06g1353 514 ProSitePatterns Putative AMP-binding domain signature. 167 178 IPR020845 -
Dere06g1353 514 Pfam AMP-binding enzyme C-terminal domain 425 500 IPR025110 -
Dere06g1353 514 Gene3D - 410 512 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1353 Dere-ChrDere06 26074822 26080817 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1353 5 513 Monolignol Biosynthesis Gene Families AT4G05160 32.762 1.83e-65 219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere06g1353 06 26074822 26080817 Dere06g1353 06 26074822 26080817 ECH