Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere06g1347 ATGTTGATTTCGGCAATGAACTCCGTCATCGTTTTGGCATTCTTAGCTTTCCTAGCATTCGCGCCAGGGCCCGTATTCTCAGAAGATAGGCTTCTGGTGAATATGACTCTGGTTCGAAACGCTCGAGCTCTCGGCGCTCTTTGTTTGGATGGGAGTTTACCGGCGTATCATTTGCACAGAGGATTCGGGGCGGGAGCCAACAACTGGCTTTTACAATTCGAGGGAGGTGGGTGGTGCAATGACGTGGCATCATGCTTAGTCAGAGCAAATTCTCGCAGGGGTTCAACTCGCTCCATGACCAAGTTGGAAGTCTTCTCTGGCATTTTGAGTAGCAATGCCTCCCGTAACCCAGATTTCTACAATTGGAACCGTGTTAAGCTCAGATATTGTGATGGAGGCTCATTTACTGGAGATGCTATGTTCAACAACGGGACATCAATGCTTTATTTCAGAGGACAAAAGATTTGGGAAGCAATCATTCGTGACCTACTACCTAAAGGTTTGGGGAAGGCGCACAAGGCTTTGCTTTCAGGTTGTTCTGCAGGAGGTTTAGCGACCTTTCACCATTGTGAGAGCTTCGCCAAGTATTTGCCAAGCAACGCTAGTGTTAAATGCTTCAGCGATGCTGGTTTCTTCCTTGACGAAAGAGATATCTCCTTGAACCACAGTATGCGATACTTCTTCAAAAGCCTTGTCTTATTGCAGGGGATAGAGCAGAACCTAAATAGAAACTGCACAAGTTCCCTGTACTTCCCAGATTTGTGTTTCTTCCCCCAGTATGTATTGAAATACATAACAAGACCATATTTCATCTTGAACTCTGCTTATGATGTATTCCAATTTCACCATATATTGGTGCCACCTTCTGCTGATTTGCGTGGACATTGGAATCACTGCAAGATAAACCCAGCAGAATGCACTCCATACCAAATTGATATACTGCAAGGCTTTAGGCGCCGCATGCTTGCAGCATTGAGACCATTCTATATATTTTCAAGAAGAGGGGGAATGTACATTAACTCATGCTTTGCTCATTGCCAAAGTGAATCCGAAGATACATGGTTTGCCGATGATTCCCCGAGAATAAACAACAAGACTATTGCAGAAGCTGTTGGAGATTGGTATTTTAGTAGGAACAGAACCAAGGAAATAGATTGTGCATATCCATGTGATACAACTTGTCATAATCTTATACCGTAG 1200 0.4417 MLISAMNSVIVLAFLAFLAFAPGPVFSEDRLLVNMTLVRNARALGALCLDGSLPAYHLHRGFGAGANNWLLQFEGGGWCNDVASCLVRANSRRGSTRSMTKLEVFSGILSSNASRNPDFYNWNRVKLRYCDGGSFTGDAMFNNGTSMLYFRGQKIWEAIIRDLLPKGLGKAHKALLSGCSAGGLATFHHCESFAKYLPSNASVKCFSDAGFFLDERDISLNHSMRYFFKSLVLLQGIEQNLNRNCTSSLYFPDLCFFPQYVLKYITRPYFILNSAYDVFQFHHILVPPSADLRGHWNHCKINPAECTPYQIDILQGFRRRMLAALRPFYIFSRRGGMYINSCFAHCQSESEDTWFADDSPRINNKTIAEAVGDWYFSRNRTKEIDCAYPCDTTCHNLIP 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere06g1347 399 PANTHER NOTUM-RELATED 15 396 IPR004963 GO:0016787
Dere06g1347 399 Pfam Pectinacetylesterase 28 379 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere06g1347 Dere-ChrDere06 25871171 25882458 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere06g1347 6 399 Carbohydrate Esterase AT5G23870 66.414 0.0 565